Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG98309 | Soybean | nucleus | 48.78 | 41.24 |
| KRH24981 | Soybean | nucleus | 48.78 | 38.84 |
| Zm00001d042954_P001 | Maize | nucleus | 48.78 | 38.84 |
| Zm00001d020585_P001 | Maize | nucleus | 48.78 | 38.84 |
| TraesCS2B01G436700.1 | Wheat | nucleus | 48.78 | 38.84 |
| KRH72633 | Soybean | nucleus | 48.78 | 38.84 |
| KRH67535 | Soybean | nucleus | 48.78 | 38.84 |
| KRH33582 | Soybean | nucleus | 48.78 | 38.84 |
| KRH30348 | Soybean | nucleus | 48.78 | 38.84 |
| KRH30347 | Soybean | nucleus | 48.78 | 38.84 |
| KRH30345 | Soybean | nucleus | 48.78 | 38.84 |
| KRH30344 | Soybean | nucleus | 48.78 | 38.84 |
| KRH19969 | Soybean | nucleus | 48.78 | 38.84 |
| KRH16996 | Soybean | nucleus | 48.78 | 38.84 |
| KRH10345 | Soybean | nucleus | 48.78 | 38.84 |
| KRH02870 | Soybean | nucleus | 48.78 | 38.84 |
| KRG98308 | Soybean | nucleus | 48.78 | 38.84 |
| KRG90333 | Soybean | nucleus | 48.78 | 38.84 |
| KRG88688 | Soybean | nucleus | 48.78 | 38.84 |
| KRH05033 | Soybean | endoplasmic reticulum | 47.56 | 37.86 |
| TraesCS2D01G413100.1 | Wheat | extracellular, golgi, nucleus | 47.56 | 37.86 |
| KRH32592 | Soybean | nucleus | 46.34 | 36.89 |
| GSMUA_Achr3P13890_001 | Banana | cytosol, nucleus, plastid, vacuole | 41.46 | 34.0 |
| HORVU1Hr1G070700.1 | Barley | nucleus, plastid | 48.78 | 31.01 |
| KRG95810 | Soybean | nucleus | 48.78 | 25.64 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:12.1.5 | EMBL:ACUP02010743 | EnsemblPlantsGene:GLYMA_17G226200 | GO:GO:0000786 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:Histone_H4 | UniProt:I1MX83 |
| InterPro:IPR009072 | EnsemblPlants:KRH05416 | ProteinID:KRH05416 | ProteinID:KRH05416.1 | PANTHER:PTHR10484 | PANTHER:PTHR10484:SF160 |
| SMART:SM00417 | SUPFAM:SSF47113 | UniParc:UPI0002968FEA | : | : | : |
Description
hypothetical protein
Coordinates
chr17:-:38068206..38069105
Molecular Weight (calculated)
9758.5 Da
IEP (calculated)
6.516
GRAVY (calculated)
-0.970
Length
82 amino acids
Sequence
(BLAST)
(BLAST)
1: MNIWLHEEGR KVSERDMRKH SRDNEASDSE IGEKRRCKED HLENVIHDAV TYTELAKRMT VTAMNVVYAL NRQEKTLYGF EF
1: MSGRGKGGKG LGKGGPAIRR LARRGGVKRI SGLIYEETRG VLKIFLENVI RDAVTYTEHA RRKTVTAMDV VYALKRQGRT LYGFGG
Arabidopsis Description
Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.