Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70247 | Canola | nucleus | 82.4 | 100.0 |
| VIT_06s0004g04370.t01 | Wine grape | nucleus | 82.4 | 100.0 |
| TraesCS7B01G334600.1 | Wheat | nucleus | 82.4 | 100.0 |
| TraesCS5D01G308500.1 | Wheat | nucleus | 82.4 | 100.0 |
| TraesCS1D01G364400.1 | Wheat | nucleus | 82.4 | 100.0 |
| TraesCS1A01G360100.1 | Wheat | nucleus | 82.4 | 100.0 |
| TraesCS1A01G287700.1 | Wheat | nucleus | 82.4 | 100.0 |
| Solyc11g066160.1.1 | Tomato | nucleus | 82.4 | 100.0 |
| PGSC0003DMT400001072 | Potato | nucleus | 82.4 | 100.0 |
| Os07t0549900-00 | Rice | nucleus | 82.4 | 100.0 |
| KRH33582 | Soybean | nucleus | 82.4 | 100.0 |
| HORVU6Hr1G066400.1 | Barley | nucleus | 82.4 | 100.0 |
| HORVU6Hr1G011710.1 | Barley | nucleus | 82.4 | 100.0 |
| HORVU2Hr1G098320.1 | Barley | nucleus | 82.4 | 100.0 |
| Bra006699.1-P | Field mustard | nucleus | 82.4 | 100.0 |
| HORVU1Hr1G022390.1 | Barley | nucleus | 82.4 | 100.0 |
| HORVU1Hr1G066960.1 | Barley | nucleus | 82.4 | 100.0 |
| HORVU1Hr1G020060.1 | Barley | nucleus | 82.4 | 100.0 |
| HORVU1Hr1G020040.1 | Barley | nucleus | 82.4 | 100.0 |
| HORVU1Hr1G073680.1 | Barley | nucleus | 82.4 | 100.0 |
| HORVU7Hr1G114720.1 | Barley | nucleus | 74.4 | 90.29 |
| HORVU7Hr1G114740.1 | Barley | nucleus | 74.4 | 89.42 |
| HORVU3Hr1G087170.1 | Barley | nucleus, plasma membrane | 85.6 | 89.17 |
| HORVU2Hr1G093680.3 | Barley | nucleus | 84.8 | 85.48 |
| HORVU6Hr1G011780.1 | Barley | nucleus | 84.0 | 83.33 |
| HORVU1Hr1G071760.1 | Barley | nucleus, plastid | 83.2 | 83.2 |
| HORVU2Hr1G098340.4 | Barley | nucleus | 85.6 | 82.95 |
| HORVU7Hr1G100410.1 | Barley | nucleus | 84.0 | 82.03 |
| HORVU1Hr1G017830.1 | Barley | nucleus | 83.2 | 81.89 |
| HORVU1Hr1G029090.2 | Barley | nucleus | 85.6 | 81.06 |
| HORVU1Hr1G070700.1 | Barley | nucleus, plastid | 83.2 | 80.62 |
| HORVU2Hr1G040050.1 | Barley | nucleus | 66.4 | 80.58 |
| HORVU3Hr1G088160.1 | Barley | nucleus | 82.4 | 80.47 |
| HORVU1Hr1G079440.1 | Barley | nucleus, plastid | 84.0 | 80.15 |
| HORVU5Hr1G086630.1 | Barley | nucleus | 82.4 | 79.84 |
| HORVU1Hr1G071210.4 | Barley | nucleus | 83.2 | 78.2 |
| HORVU6Hr1G029210.3 | Barley | nucleus, plastid | 84.8 | 77.94 |
| HORVU5Hr1G079130.1 | Barley | nucleus | 82.4 | 77.44 |
| HORVU6Hr1G011510.1 | Barley | nucleus, plastid | 85.6 | 75.89 |
| HORVU7Hr1G043300.1 | Barley | nucleus | 83.2 | 75.36 |
| HORVU3Hr1G023460.1 | Barley | nucleus | 81.6 | 72.86 |
| HORVU4Hr1G063260.2 | Barley | nucleus | 80.8 | 72.66 |
| HORVU1Hr1G071190.2 | Barley | nucleus, plastid | 83.2 | 71.23 |
| HORVU6Hr1G013530.1 | Barley | nucleus, plastid | 84.0 | 70.0 |
| HORVU5Hr1G087870.1 | Barley | nucleus, plastid | 84.0 | 70.0 |
| HORVU1Hr1G052030.2 | Barley | nucleus, plastid | 84.0 | 69.54 |
| HORVU2Hr1G097990.1 | Barley | nucleus, plastid | 83.2 | 68.42 |
| HORVU4Hr1G023200.1 | Barley | nucleus | 82.4 | 62.8 |
| HORVU5Hr1G087830.1 | Barley | nucleus | 84.8 | 62.72 |
| HORVU2Hr1G099490.1 | Barley | nucleus, plastid | 84.8 | 59.22 |
| HORVU2Hr1G106590.1 | Barley | nucleus, plastid | 67.2 | 59.15 |
| HORVU6Hr1G011030.1 | Barley | nucleus | 53.6 | 56.78 |
| HORVU5Hr1G086620.4 | Barley | nucleus | 81.6 | 55.74 |
| HORVU1Hr1G090300.44 | Barley | nucleus | 83.2 | 53.89 |
| HORVU6Hr1G011020.1 | Barley | nucleus, plastid | 81.6 | 52.04 |
| HORVU1Hr1G080200.2 | Barley | plastid | 56.0 | 39.11 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:12.1.5 | UniProt:A0A287TB36 | InterPro:CENP-T/H4_C | GO:GO:0000786 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 | GO:GO:0005730 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0005774 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006334 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009414 | GO:GO:0009506 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009628 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0046982 | EnsemblPlantsGene:HORVU6Hr1G011540 | EnsemblPlants:HORVU6Hr1G011540.1 |
| InterPro:Histone-fold | InterPro:Histone_H4 | InterPro:Histone_H4_CS | InterPro:IPR009072 | PFAM:PF15511 | PRINTS:PR00623 |
| ScanProsite:PS00047 | PANTHER:PTHR10484 | PANTHER:PTHR10484:SF160 | SMART:SM00417 | SUPFAM:SSF47113 | UniParc:UPI000B46A97D |
| SEG:seg | : | : | : | : | : |
Description
Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A287TB36]
Coordinates
chrchr6H:+:21123899..21124837
Molecular Weight (calculated)
13508.6 Da
IEP (calculated)
12.020
GRAVY (calculated)
-0.515
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: PPAAGTTAPP PFSSSSISSK KTMSGRGKGG KGLGKGGAKR HRKVLRDNIQ GITKPAIRRL ARRGGVKRIS GLIYEETRGV LKIFLENVIR DAVTYTEHAR
101: RKTVTAMDVV YALKRQGRTL YGFGG
101: RKTVTAMDVV YALKRQGRTL YGFGG
001: MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TKPAIRRLAR RGGVKRISGL IYEETRGVLK IFLENVIRDA VTYTEHARRK TVTAMDVVYA LKRQGRTLYG
101: FGG
101: FGG
Arabidopsis Description
Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.