Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G020040.1 | Barley | nucleus | 55.93 | 64.08 |
| HORVU1Hr1G020060.1 | Barley | nucleus | 55.93 | 64.08 |
| HORVU1Hr1G022390.1 | Barley | nucleus | 55.93 | 64.08 |
| HORVU6Hr1G066400.1 | Barley | nucleus | 55.93 | 64.08 |
| HORVU6Hr1G011710.1 | Barley | nucleus | 55.93 | 64.08 |
| HORVU1Hr1G066960.1 | Barley | nucleus | 55.93 | 64.08 |
| HORVU2Hr1G098320.1 | Barley | nucleus | 55.93 | 64.08 |
| HORVU1Hr1G073680.1 | Barley | nucleus | 55.93 | 64.08 |
| HORVU7Hr1G114740.1 | Barley | nucleus | 52.54 | 59.62 |
| HORVU7Hr1G114720.1 | Barley | nucleus | 51.69 | 59.22 |
| HORVU2Hr1G040050.1 | Barley | nucleus | 50.0 | 57.28 |
| HORVU1Hr1G071760.1 | Barley | nucleus, plastid | 59.32 | 56.0 |
| HORVU3Hr1G087170.1 | Barley | nucleus, plasma membrane | 55.93 | 55.0 |
| HORVU2Hr1G093680.3 | Barley | nucleus | 57.63 | 54.84 |
| HORVU7Hr1G100410.1 | Barley | nucleus | 59.32 | 54.69 |
| HORVU5Hr1G086630.1 | Barley | nucleus | 59.32 | 54.26 |
| HORVU6Hr1G011540.1 | Barley | nucleus, plastid | 56.78 | 53.6 |
| HORVU2Hr1G098340.4 | Barley | nucleus | 58.47 | 53.49 |
| HORVU6Hr1G011780.1 | Barley | nucleus | 56.78 | 53.17 |
| HORVU3Hr1G088160.1 | Barley | nucleus | 57.63 | 53.12 |
| HORVU1Hr1G017830.1 | Barley | nucleus | 56.78 | 52.76 |
| HORVU1Hr1G070700.1 | Barley | nucleus, plastid | 56.78 | 51.94 |
| HORVU5Hr1G079130.1 | Barley | nucleus | 58.47 | 51.88 |
| HORVU1Hr1G079440.1 | Barley | nucleus, plastid | 55.93 | 50.38 |
| HORVU1Hr1G029090.2 | Barley | nucleus | 55.93 | 50.0 |
| HORVU1Hr1G071210.4 | Barley | nucleus | 55.93 | 49.62 |
| HORVU3Hr1G023460.1 | Barley | nucleus | 58.47 | 49.29 |
| HORVU7Hr1G043300.1 | Barley | nucleus | 57.63 | 49.28 |
| HORVU6Hr1G029210.3 | Barley | nucleus, plastid | 56.78 | 49.26 |
| HORVU4Hr1G063260.2 | Barley | nucleus | 57.63 | 48.92 |
| HORVU6Hr1G011510.1 | Barley | nucleus, plastid | 57.63 | 48.23 |
| HORVU1Hr1G071190.2 | Barley | nucleus, plastid | 57.63 | 46.58 |
| HORVU2Hr1G097990.1 | Barley | nucleus, plastid | 58.47 | 45.39 |
| HORVU2Hr1G106590.1 | Barley | nucleus, plastid | 54.24 | 45.07 |
| HORVU5Hr1G087870.1 | Barley | nucleus, plastid | 56.78 | 44.67 |
| HORVU6Hr1G013530.1 | Barley | nucleus, plastid | 56.78 | 44.67 |
| HORVU1Hr1G052030.2 | Barley | nucleus, plastid | 55.93 | 43.71 |
| HORVU4Hr1G023200.1 | Barley | nucleus | 59.32 | 42.68 |
| HORVU5Hr1G087830.1 | Barley | nucleus | 57.63 | 40.24 |
| HORVU5Hr1G086620.4 | Barley | nucleus | 58.47 | 37.7 |
| HORVU2Hr1G099490.1 | Barley | nucleus, plastid | 55.93 | 36.87 |
| HORVU6Hr1G011020.1 | Barley | nucleus, plastid | 57.63 | 34.69 |
| HORVU1Hr1G090300.44 | Barley | nucleus | 55.93 | 34.2 |
| HORVU1Hr1G080200.2 | Barley | plastid | 44.07 | 29.05 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:12.1.5 | UniProt:A0A287TAG0 | GO:GO:0000786 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005694 | GO:GO:0006334 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0046982 | EnsemblPlantsGene:HORVU6Hr1G011030 | EnsemblPlants:HORVU6Hr1G011030.1 | InterPro:Histone-fold | InterPro:Histone_H4 | InterPro:Histone_H4_CS |
| InterPro:IPR009072 | PRINTS:PR00623 | ScanProsite:PS00047 | PANTHER:PTHR10484 | PANTHER:PTHR10484:SF160 | SMART:SM00417 |
| SUPFAM:SSF47113 | UniParc:UPI000B476A24 | SEG:seg | : | : | : |
Description
Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A287TAG0]
Coordinates
chrchr6H:+:19498252..19499358
Molecular Weight (calculated)
12834.7 Da
IEP (calculated)
11.074
GRAVY (calculated)
-0.750
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGDGDGKGE KLLLGEGEKV VGEGEKVLGK RGAKGGKGRG KGGAKRHRKV VRDHLNGITK PAIRRLARRG GVKRISGQIY EEARHVLKVF LEATVRDALT
101: CSEHSRRKTV TGKDVVYY
101: CSEHSRRKTV TGKDVVYY
001: MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TKPAIRRLAR RGGVKRISGL IYEETRGVLK IFLENVIRDA VTYTEHARRK TVTAMDVVYA LKRQGRTLYG
101: FGG
101: FGG
Arabidopsis Description
Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.