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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:
  • plastid 3
  • nucleus 2
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, nucleus, plastid
Any Predictor:mitochondrion, nucleus, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:nucleus
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d001966_P001
Zm00001d007285_P002
Zm00001d009715_P001
Zm00001d014046_P001 nucleus
Zm00001d015611_P002
Zm00001d016358_P006
Zm00001d017475_P002
Zm00001d017649_P001
Zm00001d023990_P001
Zm00001d026517_P001
Zm00001d027373_P003
Zm00001d027585_P001 nucleus
Zm00001d027655_P001
Zm00001d029988_P001
Zm00001d032732_P002 nucleus
Zm00001d036959_P003
Zm00001d037050_P001
Zm00001d043225_P001
Zm00001d044672_P005
Zm00001d044874_P001
Zm00001d046352_P001
Zm00001d047069_P001
Zm00001d048363_P001 nucleus
Zm00001d048394_P001
Zm00001d048497_P002
Zm00001d049031_P001
Zm00001d049032_P001
Zm00001d051484_P001
Zm00001d052194_P001
Zm00001d053356_P002
Zm00001d053576_P001
Zm00001d053930_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G15570.1 Zm00001d016358_P006 AT1G57720.1 20706207
AT1G15570.1 Zm00001d036959_P003 AT1G57720.1 20706207
AT1G15570.1 Zm00001d046352_P001 AT1G57720.1 20706207
AT1G15570.1 Zm00001d053576_P001 AT1G57720.1 20706207
AT1G15570.1 Zm00001d043225_P001 AT1G61870.1 20706207
AT1G15570.1 Zm00001d037050_P001 AT1G64180.1 21798944
AT1G15570.1 Zm00001d053356_P002 AT1G64180.1 21798944
AT1G15570.1 Zm00001d015611_P002 AT2G27960.1 20706207
AT1G15570.1 Zm00001d027655_P001 AT2G27960.1 20706207
AT1G15570.1 Zm00001d048394_P001 AT2G27960.1 20706207
AT1G15570.1 Zm00001d001966_P001 AT3G11270.1 20706207
AT1G15570.1 Zm00001d026517_P001 AT3G11270.1 20706207
AT1G15570.1 Zm00001d009715_P001 AT3G24140.1 21798944
AT1G15570.1 Zm00001d017475_P002 AT3G48150.1 21798944
AT1G15570.1 Zm00001d027373_P003 AT3G48750.1 16415207
AT1G15570.1 Zm00001d048497_P002 AT3G48750.1 16415207
AT1G15570.1 Zm00001d053930_P001 AT3G48750.1 16415207
AT1G15570.1 Zm00001d044672_P005 AT3G54180.1 20706207
AT1G15570.1 Zm00001d017649_P001 AT4G17680.1 21798944
AT1G15570.1 Zm00001d029988_P001 AT4G17680.1 21798944
AT1G15570.1 Zm00001d047069_P001 AT4G17680.1 21798944
AT1G15570.1 Zm00001d051484_P001 AT4G17680.1 21798944
AT1G15570.1 Zm00001d044874_P001 AT4G25200.1 21798944
AT1G15570.1 Zm00001d052194_P001 AT4G25200.1 21798944
AT1G15570.1 Zm00001d007285_P002 AT5G16970.1 20706207
AT1G15570.1 Zm00001d023990_P001 AT5G16970.1 20706207
AT1G15570.1 Zm00001d049031_P001 AT5G16970.1 20706207
AT1G15570.1 Zm00001d049032_P001 AT5G16970.1 20706207
AT1G80370.1 Zm00001d014046_P001 AT2G32710.1 20018602
AT1G80370.1 Zm00001d027585_P001 AT2G32710.1 20018602
AT1G80370.1 Zm00001d032732_P002 AT2G32710.1 20018602
AT1G80370.1 Zm00001d048363_P001 AT2G32710.1 20018602
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG23504 Sorghum mitochondrion, nucleus 87.42 87.78
GSMUA_Achr1P14000_001 Banana nucleus, plasma membrane, plastid 32.58 63.97
Zm00001d014756_P006 Maize nucleus, plastid 60.62 56.43
Bra000822.1-P Field mustard nucleus 40.0 51.46
CDY61993 Canola nucleus 40.0 51.46
CDY48212 Canola nucleus 39.59 50.93
Bra031463.1-P Field mustard nucleus 38.14 50.14
CDY53304 Canola plastid 39.79 47.19
CDX81722 Canola nucleus, plastid 39.18 47.15
Bra026756.1-P Field mustard plastid 39.38 46.7
CDY36574 Canola mitochondrion, nucleus 41.86 46.56
VIT_09s0002g05240.t01 Wine grape nucleus 46.8 46.33
CDY66415 Canola nucleus 41.44 46.31
AT1G15570.1 Thale cress nucleus, plastid 42.27 45.56
CDX79389 Canola plastid 40.41 45.27
GSMUA_Achr3P25340_001 Banana nucleus 50.52 45.2
Bra003563.1-P Field mustard plastid 40.0 44.91
CDX67944 Canola plastid 39.79 44.68
PGSC0003DMT400006576 Potato nucleus 42.27 44.28
KRH47513 Soybean nucleus 43.3 44.12
Solyc03g120440.1.1 Tomato nucleus, plastid 41.65 44.1
CDX96836 Canola nucleus, plastid 39.79 43.86
Bra016654.1-P Field mustard nucleus, plastid 40.0 43.6
Bra026120.1-P Field mustard nucleus 41.86 43.56
AT1G80370.1 Thale cress plastid 41.03 43.17
Bra008477.1-P Field mustard plastid 40.62 43.11
CDY37592 Canola mitochondrion, plastid 40.41 42.89
KRH44391 Soybean nucleus 41.65 42.89
CDY38664 Canola nucleus, plastid 39.79 42.42
CDY39984 Canola plastid 39.18 42.41
CDX87305 Canola plastid 39.59 41.56
Bra035186.1-P Field mustard plastid 39.59 41.56
Zm00001d033365_P002 Maize nucleus 30.1 39.25
Zm00001d019469_P001 Maize extracellular 11.34 38.46
Zm00001d030849_P001 Maize nucleus 31.75 36.41
Zm00001d013744_P001 Maize nucleus 26.39 35.85
Zm00001d041334_P001 Maize nucleus, plastid 30.93 34.32
Zm00001d032128_P001 Maize cytosol 10.72 32.91
Zm00001d040381_P001 Maize plastid 33.2 30.21
Zm00001d021353_P002 Maize mitochondrion, nucleus 11.75 28.5
Zm00001d036360_P002 Maize nucleus 24.12 27.59
Zm00001d009011_P001 Maize nucleus, plastid 28.66 27.25
Zm00001d010404_P001 Maize nucleus 24.95 24.95
Zm00001d026129_P001 Maize nucleus 21.86 24.88
Zm00001d012560_P002 Maize nucleus, plastid 22.68 24.5
Zm00001d002662_P010 Maize nucleus 22.27 23.74
Zm00001d048127_P001 Maize plastid 23.3 23.59
Zm00001d043164_P002 Maize nucleus 22.68 22.73
Zm00001d010656_P001 Maize nucleus 20.62 22.42
Zm00001d008221_P001 Maize nucleus 20.62 20.88
Zm00001d020033_P001 Maize nucleus 21.86 19.49
Zm00001d020996_P001 Maize nucleus 20.82 18.57
Protein Annotations
Gene3D:1.10.472.10EntrezGene:100285386MapMan:13.1.1.1.1ProteinID:AQK39915.1UniProt:B6U4E0InterPro:Cyclin-like
InterPro:Cyclin-like_sfInterPro:Cyclin_C-domInterPro:Cyclin_NEMBL:EU972105GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634PFAM:PF00134PFAM:PF02984PIRSF:PIRSF001771PANTHER:PTHR10177
PANTHER:PTHR10177:SF239SMART:SM00385SMART:SM01332SUPFAM:SSF47954UniParc:UPI000182F801EnsemblPlantsGene:Zm00001d023732
EnsemblPlants:Zm00001d023732_P002EnsemblPlants:Zm00001d023732_T002::::
Description
Cyclin superfamily protein%2C putative%3B Cyclin-A2
Coordinates
chr10:+:17744759..17761320
Molecular Weight (calculated)
53709.3 Da
IEP (calculated)
8.194
GRAVY (calculated)
-0.286
Length
485 amino acids
Sequence
(BLAST)
001: MAARKKKPLL IACQATSARI TRSQAAANST RSGLAPSVPV PLKTEHNHAA KKKMKREASD ENASADAGAS APLPKRRTVL KNVTNISCAK ISKRCTAVTG
101: LKLGPSQKAG QSINKQCTNK ISMLLPLAVG GSSLVDDSNN AEETQMVDLL AQKEKQIVLL KEAQPLQNTE QNKGGACDEA SVEERNAMNV HETAALKAGV
201: SNGLNIVDID KNNGDPQMCV TYVAEIYRNL MASELIRRPR SNYMETLQQD ITASMRGVLI DWLVEVSDEY KLVADTLYLT VYLIDQFLSQ NCIQTHKLQL
301: LGITSMLIAS KYEEYSAPSA EEFCNITAGT YAKAEVLEME QQVLNDLGFH LSVPTTNTFL RRFLRAAQAS RTAHLTTLNY LASYLAELTL ISYDFMKFLP
401: SEVAASSIFL AKWTLDQSDH PWNPTLEHYT SYKSFDIRTC VRALQELQHN TSNCPLNAIR EKYGQQKFEC VANLRSPELL RSLFS
Best Arabidopsis Sequence Match ( AT5G11300.1 )
(BLAST)
001: MYCSSSMHPN ANKENISTSD VQESFVRITR SRAKKAMGRG VSIPPTKPSF KQQKRRAVLK DVSNTSADII YSELRKGGNI KANRKCLKEP KKAAKEGANS
101: AMDILVDMHT EKSKLAEDLS KIRMAEAQDV SLSNFKDEEI TEQQEDGSGV MELLQVVDID SNVEDPQCCS LYAADIYDNI HVAELQQRPL ANYMELVQRD
201: IDPDMRKILI DWLVEVSDDY KLVPDTLYLT VNLIDRFLSN SYIERQRLQL LGVSCMLIAS KYEELSAPGV EEFCFITANT YTRPEVLSME IQILNFVHFR
301: LSVPTTKTFL RRFIKAAQAS YKVPFIELEY LANYLAELTL VEYSFLRFLP SLIAASAVFL ARWTLDQTDH PWNPTLQHYT RYEVAELKNT VLAMEDLQLN
401: TSGCTLAATR EKYNQPKFKS VAKLTSPKRV TSLFSR
Arabidopsis Description
CYCA2-2Cyclin-A2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q147G5]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.