Factsheet for Zm00001d026517_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d020426_P001
Zm00001d032224_P001
Zm00001d050383_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G05780.1	Zm00001d020426_P001	AT3G25860.1	24846764
AT5G05780.1	Zm00001d032224_P001	AT3G25860.1	24846764
AT5G05780.1	Zm00001d050383_P001	AT3G25860.1	24846764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11600	Sorghum	cytosol	87.01	92.9
TraesCS2D01G496100.2	Wheat	cytosol	84.59	90.32
TraesCS2B01G524100.2	Wheat	cytosol	84.59	90.32
TraesCS2A01G495800.1	Wheat	golgi, unclear	84.59	90.32
HORVU2Hr1G110590.1	Barley	cytosol	84.59	90.32
Zm00001d001966_P001	Maize	cytosol	87.01	90.28
Os04t0661900-01	Rice	cytosol	45.02	87.65
CDX80973	Canola	cytosol, nucleus, vacuole	80.66	86.69
GSMUA_Achr8P20510_001	Banana	cytosol	80.97	86.45
AT5G05780.1	Thale cress	cytosol	80.36	86.36
CDY11340	Canola	extracellular	80.36	86.36
CDX70129	Canola	cytosol, nucleus, vacuole	80.36	86.36
Bra005867.1-P	Field mustard	cytosol, nucleus, vacuole	80.06	86.04
Bra009133.1-P	Field mustard	cytosol	80.06	86.04
GSMUA_Achr9P25620_001	Banana	cytosol	80.66	85.85
CDX98863	Canola	cytosol	79.76	85.71
CDY04967	Canola	cytosol	79.76	85.71
CDY14102	Canola	cytosol	79.76	85.71
Bra028748.1-P	Field mustard	cytosol, nucleus, plastid	79.46	85.39
AT3G11270.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	79.76	85.16
VIT_08s0007g01980.t01	Wine grape	cytosol	79.46	84.84
KRH31114	Soybean	endoplasmic reticulum	79.15	84.79
KRG97770	Soybean	nucleus	78.85	84.47
PGSC0003DMT400042160	Potato	cytosol	78.25	83.55
Solyc01g008370.2.1	Tomato	nucleus	78.25	83.55
VIT_02s0025g01490.t01	Wine grape	cytosol	77.64	82.9
HORVU4Hr1G012380.1	Barley	cytosol	18.73	65.96
KRG89488	Soybean	cytosol	39.58	48.88
CDY17426	Canola	cytosol, nucleus, plastid	36.56	44.16
CDY04139	Canola	cytosol	36.56	42.91
CDX70711	Canola	cytosol	15.71	40.94
Bra017408.1-P	Field mustard	cytosol	38.07	40.91
CDY06213	Canola	cytosol	17.82	33.71
Bra032422.1-P	Field mustard	cytosol, nucleus, plastid	28.7	31.77
Bra006369.1-P	Field mustard	cytosol	34.14	28.18
CDX78706	Canola	cytosol	33.23	27.99
Zm00001d035752_P002	Maize	plastid	22.96	24.92
Zm00001d011100_P002	Maize	plastid	21.15	24.39
Zm00001d052848_P004	Maize	plastid	20.24	19.65
Zm00001d031323_P001	Maize	extracellular	19.64	19.58

Protein Annotations

EntrezGene:100276453	MapMan:19.2.6.2.2.7	Gene3D:3.40.140.10	UniProt:A0A1D6JGZ2	ProteinID:AQK46931.1	GO:GO:0000502
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005838	InterPro:IPR037518	InterPro:JAMM/MPN+_dom	InterPro:MPN	InterPro:MPN_RPN7_8	PFAM:PF01398
PFAM:PF13012	PFscan:PS50249	PANTHER:PTHR10540	PANTHER:PTHR10540:SF7	InterPro:Rpn11/EIF3F_C	SMART:SM00232
UniParc:UPI0008426D5C	EnsemblPlantsGene:Zm00001d026517	EnsemblPlants:Zm00001d026517_P001	EnsemblPlants:Zm00001d026517_T001	:	:

Description

26S proteasome non-ATPase regulatory subunit 7 homolog A

Coordinates

chr10:+:147469298..147473845

Molecular Weight (calculated)

37497.4 Da

IEP (calculated)

6.189

GRAVY (calculated)

0.067

Length

331 amino acids

Sequence
(BLAST)

001: MDVVKAAQLS GRTLERVVVH PLVLLSIVDH YNRVARDTRK RVVGVLLGTS SRGSVDVTNS YAVPFEEDDK DPRIWFLDHN YHESMFSMFK RINAKEHVVG
101: WYSTGPKLRE NDLDVHALFN SYVPNPVLVI IDVQPKELGI PTKAYYAVEE VKENATQKSQ KVFVHVPSEI AAHEVEEIGV EHLLRDVKDT TISTLATEVT
201: SKLAALKGLD ARLREIRSYL DLVIEGKLPL NHEILYHLQD VFNLLPNLNV NELIKAFAVK TNDMMLVIYL SSLIRSVIAL HNLINNKVGC FYLLLVLFQS
301: LGASLVDFDV FVTLTTSNEI TQFCCEHEIW S

Best Arabidopsis Sequence Match ( AT5G05780.1 )
(BLAST)

001: MDVIKTQQIS ARTIEKVVVH PLVLLSIVDH YNRVAKDSSK RVVGVLLGSS SRGVVDVTNS YAVPFEEDDK DPSIWFLDHN YHESMFHMFK RINAKEHVVG
101: WYSTGPKLRE NDLDVHALFN GYVPNPVLVI IDVQPKELGI PTKAYYAVEE VKENATQKSQ KVFVHVSTEI AAHEVEEIGV EHLLRDVKDT TISTLATEVT
201: AKLTALKGLD ARLREIRSYL DLVIEGKLPL NHEILYHLQD VFNLLPNLNV NELVKAFSVK TNDMMLVIYL SSLIRSVIAL HNLINNKLLN KEHEKAEDSK
301: PVAIPATS

Arabidopsis Description

RPN8A26S proteasome non-ATPase regulatory subunit 7 homolog A [Source:UniProtKB/Swiss-Prot;Acc:O24412]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.