Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G05780.1 | Thale cress | cytosol | 94.84 | 95.45 |
| EES11600 | Sorghum | cytosol | 89.68 | 89.68 |
| HORVU2Hr1G110590.1 | Barley | cytosol | 89.03 | 89.03 |
| KRH31114 | Soybean | endoplasmic reticulum | 88.71 | 89.0 |
| KRG97770 | Soybean | nucleus | 88.39 | 88.67 |
| TraesCS2D01G496100.2 | Wheat | cytosol | 88.39 | 88.39 |
| TraesCS2B01G524100.2 | Wheat | cytosol | 88.39 | 88.39 |
| TraesCS2A01G495800.1 | Wheat | golgi, unclear | 88.39 | 88.39 |
| GSMUA_Achr9P25620_001 | Banana | cytosol | 88.06 | 87.78 |
| GSMUA_Achr8P20510_001 | Banana | cytosol | 87.74 | 87.74 |
| Zm00001d001966_P001 | Maize | cytosol | 89.68 | 87.15 |
| Solyc01g008370.2.1 | Tomato | nucleus | 87.1 | 87.1 |
| PGSC0003DMT400042160 | Potato | cytosol | 87.1 | 87.1 |
| Zm00001d026517_P001 | Maize | cytosol, nucleus, plasma membrane | 85.16 | 79.76 |
| Os04t0661900-01 | Rice | cytosol | 43.55 | 79.41 |
| VIT_07s0005g03000.t01 | Wine grape | nucleus | 21.29 | 68.04 |
| VIT_03s0017g00150.t01 | Wine grape | nucleus | 20.65 | 65.98 |
| HORVU4Hr1G012380.1 | Barley | cytosol | 18.71 | 61.7 |
| KRG89488 | Soybean | cytosol | 41.94 | 48.51 |
| CDY17426 | Canola | cytosol, nucleus, plastid | 40.0 | 45.26 |
| CDY04139 | Canola | cytosol | 40.97 | 45.04 |
| Bra017408.1-P | Field mustard | cytosol | 42.58 | 42.86 |
| CDX70711 | Canola | cytosol | 16.77 | 40.94 |
| CDY06213 | Canola | cytosol | 19.35 | 34.29 |
| Bra032422.1-P | Field mustard | cytosol, nucleus, plastid | 30.65 | 31.77 |
| Bra006369.1-P | Field mustard | cytosol | 37.42 | 28.93 |
| CDX78706 | Canola | cytosol | 36.45 | 28.75 |
| AT2G39990.1 | Thale cress | plastid | 22.9 | 24.23 |
| AT5G56280.1 | Thale cress | plastid | 21.61 | 21.14 |
| AT4G26430.1 | Thale cress | plastid | 21.61 | 21.14 |
Protein Annotations
| MapMan:19.2.6.2.2.7 | Gene3D:3.40.140.10 | EntrezGene:820298 | EntrezGene:830463 | ProteinID:AAG50979.1 | ProteinID:AED90923.1 |
| ProteinID:AEE75022.1 | EMBL:AF378878 | EMBL:AK228032 | ArrayExpress:AT3G11270 | EnsemblPlantsGene:AT3G11270 | RefSeq:AT3G11270 |
| TAIR:AT3G11270 | RefSeq:AT3G11270-TAIR-G | EnsemblPlants:AT3G11270.1 | TAIR:AT3G11270.1 | EMBL:AY087393 | EMBL:AY230839 |
| EMBL:AY230840 | EMBL:AY258412 | Unigene:At.39785 | ProteinID:BAB09672.1 | EMBL:BT002610 | GO:GO:0000003 |
| GO:GO:0000502 | GO:GO:0002376 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005838 |
| GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009653 |
| GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009965 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0030163 | GO:GO:0043161 | GO:GO:0045087 | InterPro:IPR037518 | InterPro:JAMM/MPN+_dom | MEROPS:M67.973 |
| Symbol:MEE34 | InterPro:MPN | InterPro:MPN_RPN7_8 | RefSeq:NP_187736.1 | RefSeq:NP_196197.1 | PFAM:PF01398 |
| PFAM:PF13012 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50249 | PANTHER:PTHR10540 | PANTHER:PTHR10540:SF7 | UniProt:Q9C774 | InterPro:Rpn11/EIF3F_C |
| SMART:SM00232 | EMBL:U54560 | UniParc:UPI00000A0A28 | SEG:seg | : | : |
Description
RPN8B26S proteasome non-ATPase regulatory subunit 7 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9C774]
Coordinates
chr3:+:3528822..3531724
Molecular Weight (calculated)
35087.4 Da
IEP (calculated)
6.149
GRAVY (calculated)
-0.093
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVIKTQQIS ARTIEKVIVH PLVLLSIVDH YNRVAKDTSK RVVGVLLGSS SRGTVDVTNS YAVPFEEDDK DTSIWFLDHN YHESMFHMFK RINAKEHIVG
101: WYSTGPKLRE NDLDVHALFN GYVPNPVLVI IDVQPKELGI PTKAYYAVEE VKENATQKSQ QVFVHVPTEI AAHEVEEIGV EHLLRDVKDT TISTLATEVT
201: AKLTALKGLD ARLREIRTYL DLVIEGKLPL NHEILYHLQD VFNLLPNLNV NELVKAFAVK TNDMMLVIYL SSLIRSVIAL HSLINNKLLN KEHEKAEDSK
301: PVDIPLITES
101: WYSTGPKLRE NDLDVHALFN GYVPNPVLVI IDVQPKELGI PTKAYYAVEE VKENATQKSQ QVFVHVPTEI AAHEVEEIGV EHLLRDVKDT TISTLATEVT
201: AKLTALKGLD ARLREIRTYL DLVIEGKLPL NHEILYHLQD VFNLLPNLNV NELVKAFAVK TNDMMLVIYL SSLIRSVIAL HSLINNKLLN KEHEKAEDSK
301: PVDIPLITES
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.