Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os08t0431300-01 | |
| Os09t0408600-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G05780.1 | Os08t0431300-01 | AT3G25860.1 | 24846764 |
| AT5G05780.1 | Os09t0408600-01 | AT3G25860.1 | 24846764 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G012380.1 | Barley | cytosol | 34.71 | 62.77 |
| EES11600 | Sorghum | cytosol | 87.65 | 48.06 |
| TraesCS2D01G496100.2 | Wheat | cytosol | 87.06 | 47.74 |
| TraesCS2B01G524100.2 | Wheat | cytosol | 87.06 | 47.74 |
| TraesCS2A01G495800.1 | Wheat | golgi, unclear | 87.06 | 47.74 |
| HORVU2Hr1G110590.1 | Barley | cytosol | 87.06 | 47.74 |
| Zm00001d001966_P001 | Maize | cytosol | 87.65 | 46.71 |
| Zm00001d026517_P001 | Maize | cytosol, nucleus, plasma membrane | 87.65 | 45.02 |
| CDY11340 | Canola | extracellular | 81.18 | 44.81 |
| CDX80973 | Canola | cytosol, nucleus, vacuole | 81.18 | 44.81 |
| AT5G05780.1 | Thale cress | cytosol | 80.59 | 44.48 |
| CDY14102 | Canola | cytosol | 80.59 | 44.48 |
| CDY04967 | Canola | cytosol | 80.59 | 44.48 |
| Bra005867.1-P | Field mustard | cytosol, nucleus, vacuole | 80.59 | 44.48 |
| Bra009133.1-P | Field mustard | cytosol | 80.59 | 44.48 |
| CDX70129 | Canola | cytosol, nucleus, vacuole | 80.59 | 44.48 |
| GSMUA_Achr8P20510_001 | Banana | cytosol | 80.59 | 44.19 |
| Bra028748.1-P | Field mustard | cytosol, nucleus, plastid | 80.0 | 44.16 |
| CDX98863 | Canola | cytosol | 79.41 | 43.83 |
| GSMUA_Achr9P25620_001 | Banana | cytosol | 80.0 | 43.73 |
| KRH31114 | Soybean | endoplasmic reticulum | 79.41 | 43.69 |
| KRG97770 | Soybean | nucleus | 79.41 | 43.69 |
| AT3G11270.1 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 79.41 | 43.55 |
| PGSC0003DMT400042160 | Potato | cytosol | 78.24 | 42.9 |
| VIT_08s0007g01980.t01 | Wine grape | cytosol | 78.24 | 42.9 |
| Solyc01g008370.2.1 | Tomato | nucleus | 77.65 | 42.58 |
| VIT_02s0025g01490.t01 | Wine grape | cytosol | 77.06 | 42.26 |
| CDY17426 | Canola | cytosol, nucleus, plastid | 57.06 | 35.4 |
| CDY04139 | Canola | cytosol | 58.24 | 35.11 |
| CDY06213 | Canola | cytosol | 32.94 | 32.0 |
| Bra017408.1-P | Field mustard | cytosol | 57.06 | 31.49 |
| CDX70711 | Canola | cytosol | 20.0 | 26.77 |
| Bra032422.1-P | Field mustard | cytosol, nucleus, plastid | 40.59 | 23.08 |
| Bra006369.1-P | Field mustard | cytosol | 54.12 | 22.94 |
| CDX78706 | Canola | cytosol | 45.29 | 19.59 |
| KRG89488 | Soybean | cytosol | 30.0 | 19.03 |
| Os05t0104800-01 | Rice | nucleus | 25.88 | 15.49 |
| Os08t0500000-01 | Rice | plasma membrane | 24.12 | 12.46 |
| Os12t0622900-01 | Rice | cytosol | 18.24 | 6.21 |
| Os12t0621900-02 | Rice | plastid | 12.35 | 3.83 |
Protein Annotations
| MapMan:19.2.6.2.2.7 | Gene3D:3.40.140.10 | UniProt:A0A0N7KJV4 | ProteinID:BAS91465.1 | GO:GO:0000502 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005838 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0043161 |
| InterPro:IPR037518 | InterPro:JAMM/MPN+_dom | InterPro:MPN | InterPro:MPN_RPN7_8 | EnsemblPlantsGene:Os04g0661900 | EnsemblPlants:Os04t0661900-01 |
| PFAM:PF01398 | PFscan:PS50249 | PANTHER:PTHR10540 | PANTHER:PTHR10540:SF7 | SMART:SM00232 | UniParc:UPI000393B7D7 |
Description
19S REGULATORY PARTICLE NON-ATPASE SUBUNIT 8Similar to 26S proteasome regulatory particle non-ATPase subunit8. (Os04t0661900-01);Similar to 26S proteasome regulatory particle non-ATPase subunit8. (Os04t0661900-02)
Coordinates
chr4:+:33777470..33781125
Molecular Weight (calculated)
19264.1 Da
IEP (calculated)
8.223
GRAVY (calculated)
-0.296
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVVKAAQLS GRTLEKVVVH PLVLLSIVDH YNRVARDTRK RVVGVLLGTS SRGSVDVTNS YAVPFEEDDK DPRIWFLDHN YHESMFSMFK RINAKEHVVG
101: WYSTGPKLRE NDLDIHALFN NYVPNPVLVI IDVQPKELGI PTKAYYAVEE VKENATQKQS KGVCSCSFSK
101: WYSTGPKLRE NDLDIHALFN NYVPNPVLVI IDVQPKELGI PTKAYYAVEE VKENATQKQS KGVCSCSFSK
001: MDVIKTQQIS ARTIEKVVVH PLVLLSIVDH YNRVAKDSSK RVVGVLLGSS SRGVVDVTNS YAVPFEEDDK DPSIWFLDHN YHESMFHMFK RINAKEHVVG
101: WYSTGPKLRE NDLDVHALFN GYVPNPVLVI IDVQPKELGI PTKAYYAVEE VKENATQKSQ KVFVHVSTEI AAHEVEEIGV EHLLRDVKDT TISTLATEVT
201: AKLTALKGLD ARLREIRSYL DLVIEGKLPL NHEILYHLQD VFNLLPNLNV NELVKAFSVK TNDMMLVIYL SSLIRSVIAL HNLINNKLLN KEHEKAEDSK
301: PVAIPATS
101: WYSTGPKLRE NDLDVHALFN GYVPNPVLVI IDVQPKELGI PTKAYYAVEE VKENATQKSQ KVFVHVSTEI AAHEVEEIGV EHLLRDVKDT TISTLATEVT
201: AKLTALKGLD ARLREIRSYL DLVIEGKLPL NHEILYHLQD VFNLLPNLNV NELVKAFSVK TNDMMLVIYL SSLIRSVIAL HNLINNKLLN KEHEKAEDSK
301: PVAIPATS
Arabidopsis Description
RPN8A26S proteasome non-ATPase regulatory subunit 7 homolog A [Source:UniProtKB/Swiss-Prot;Acc:O24412]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.