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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • nucleus 1
  • mitochondrion 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os08t0500000-01 Rice plasma membrane 20.84 31.61
Os12t0621900-02 Rice plastid 34.67 31.51
TraesCS3A01G162000.1 Wheat cytosol, plastid 30.26 25.55
Os04t0661900-01 Rice cytosol 6.21 18.24
HORVU2Hr1G110670.1 Barley cytosol, mitochondrion, plastid 3.01 15.79
Os05t0104800-01 Rice nucleus 8.02 14.08
TraesCS1D01G370500.1 Wheat cytosol 2.81 3.05
Protein Annotations
Gene3D:3.40.140.10MapMan:35.1EntrezGene:4352827ProteinID:ABA99417.1ProteinID:BAF30327.1ProteinID:BAT18154.1
ProteinID:EEE53639.1GO:GO:0000166GO:GO:0000338GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003700GO:GO:0003824GO:GO:0004812GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351
GO:GO:0006355GO:GO:0006412GO:GO:0006418GO:GO:0006464GO:GO:0008150GO:GO:0008152
GO:GO:0008180GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0019538
InterPro:JAMM/MPN+_domInterPro:MPN_CSN6EnsemblPlantsGene:Os12g0622900EnsemblPlants:Os12t0622900-01PFAM:PF01398PANTHER:PTHR10540
PANTHER:PTHR10540:SF8UniProt:Q2QLZ5TMHMM:TMhelixUniParc:UPI0000680BE0RefSeq:XP_015618812.1SEG:seg
Description
Mov34/MPN/PAD-1 family protein. (Os12t0622900-01)
Coordinates
chr12:+:26599762..26604728
Molecular Weight (calculated)
56103.1 Da
IEP (calculated)
6.054
GRAVY (calculated)
-0.135
Length
499 amino acids
Sequence
(BLAST)
001: MPPHEDALDA GAVDVLTFRL HPLAVLKLSH RIREFVHLHD DQYQQARMSG CVIGVRRGGT VDISDTFDIL HDPDPGTFDR ALLEKDQEIY KKAFPDLSVL
101: GWYSIGTNVH ATDTGIHHGD YTDMQIHQTL MDANGTAFYL LLNPAINFSH KDIPVTIYER VLCNSDGSPP VSFVQGNYTV EIVGAERISL DHADFLYPSP
201: CVVFDVLAPP LGEKKNAFRT MLFETPSGFA MFRVSDVLFR YPEDIWSSFT DPHTAHQVVR TIGFIEVGDK SVVWDNDIGP GEDIEHFILK FPIKSLVVPD
301: AQLKFIIEKN LNISCWFNGR IVPELIWGLN YALDEFVPRE KGNLSNERHF PLSKQLHEQL KAYGFSISPQ LINREFITSF GYLNYLERTS NCISGDLHQK
401: FDRFFCGLEM SEGEFVRGVA HRLHSMEEVA STPGRREALS NAEFLLAVPK KKCNTISRLK RMEAEDRGTG LGHPWVCAAA VAVGFGVMAG LCIAMKRAN
Best Arabidopsis Sequence Match ( AT5G56280.1 )
(BLAST)
001: MAPSSSSGLT FKLHPLVIVN ISDHYTRVKT QLNPPASICA SGHGSNNGEA MFQQNPRVYG CVIGVQRGRT VEIFNSFELL YDPSTQTLDR SFLEKKQELY
101: KKVFPDFYIL GWYSTGSDAE ESDMHIHKAL MDINESPVYV LLNPAINHTQ KDLPVTIYES ELHVIDGIPQ LIFAHTSYTI ETVEAERISV DHVAHLKPSD
201: GGSAATQLAA HLTGIHSAIK MLNSRIRVLY QNLAAMQKGD KSCDNSVLRQ VSSLLRRLPA MESERFQDNF LMEYNDKLLI TYLAMITNCS SNMNEMVDKF
301: NTAYDRNTRR GGRTAFM
Arabidopsis Description
CSN6ACSN6A [Source:UniProtKB/TrEMBL;Acc:A0A178UD14]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.