Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0621900-02 | Rice | plastid | 29.78 | 32.06 |
| Os12t0622900-01 | Rice | cytosol | 25.55 | 30.26 |
| TraesCS7A01G241300.1 | Wheat | plastid | 16.75 | 29.38 |
| TraesCS2A01G495800.1 | Wheat | golgi, unclear | 9.14 | 17.42 |
| HORVU2Hr1G110670.1 | Barley | cytosol, mitochondrion, plastid | 2.2 | 13.68 |
| TraesCS6A01G090300.1 | Wheat | golgi | 6.43 | 13.01 |
| TraesCS1D01G370500.1 | Wheat | cytosol | 3.72 | 4.79 |
Protein Annotations
| Gene3D:3.40.140.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0000338 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008180 | GO:GO:0009987 | GO:GO:0019538 | InterPro:JAMM/MPN+_dom |
| InterPro:MPN_CSN6 | PFAM:PF01398 | PANTHER:PTHR10540 | PANTHER:PTHR10540:SF8 | EnsemblPlantsGene:TraesCS3A01G162000 | EnsemblPlants:TraesCS3A01G162000.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:164403801..164409601
Molecular Weight (calculated)
66137.6 Da
IEP (calculated)
8.227
GRAVY (calculated)
-0.280
Length
591 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSPDAATGE ASTPLSTRVR AFKIHPNVVR NFLDHHIRVK DQAARCGGSS FSSKSKDAAR MFGCVIGMKS GQTVEILDSL DLLLDPVSGT LCRALLEKKE
101: HYEKFFPGSV VLGWYSSRTM AAEQDTDMQI HKALMDAEGR AFYIVLNPAI YLSQMDLCVT IYDCVLGATD GSPRLNLVKF DCTTEILEAD RISSDCSTGF
201: KRCFLCPNRA VCDVNLLPLE KIAVAQRPHQ AFRTMLLETP SGFAMFSVSA RLLKYPEEIW SWFTRLSDAH DAISTLGFIK VHDKSVARDS DVGPGKDLER
301: FILKFTTTHA LIVPDADLKF VIEKKLKVIC WLDAHIVDEL TWGLKYVLDK FLPEEKDSPC HLLLSKELEK KIKSYGFSVS PQVIDREFIT TVGYLYELEL
401: TSESLSVFLH HKFDDCFYGR RLSDLEFAKA ISDRLKSSEE MIPNYGEYSK QDIVRFTDYV LAAPGLKNDA ILYLKKLERA ARKYRLAVPD EQKKSMEFLR
501: KAEARDKESK LVVNIEAAAS KSKAVGKNKK DDDIDDSKPE TRKRGVAGSV LKMPASNKKA KVATPSCQKT GGCPCGSSAP GKEYRSYPSN Q
101: HYEKFFPGSV VLGWYSSRTM AAEQDTDMQI HKALMDAEGR AFYIVLNPAI YLSQMDLCVT IYDCVLGATD GSPRLNLVKF DCTTEILEAD RISSDCSTGF
201: KRCFLCPNRA VCDVNLLPLE KIAVAQRPHQ AFRTMLLETP SGFAMFSVSA RLLKYPEEIW SWFTRLSDAH DAISTLGFIK VHDKSVARDS DVGPGKDLER
301: FILKFTTTHA LIVPDADLKF VIEKKLKVIC WLDAHIVDEL TWGLKYVLDK FLPEEKDSPC HLLLSKELEK KIKSYGFSVS PQVIDREFIT TVGYLYELEL
401: TSESLSVFLH HKFDDCFYGR RLSDLEFAKA ISDRLKSSEE MIPNYGEYSK QDIVRFTDYV LAAPGLKNDA ILYLKKLERA ARKYRLAVPD EQKKSMEFLR
501: KAEARDKESK LVVNIEAAAS KSKAVGKNKK DDDIDDSKPE TRKRGVAGSV LKMPASNKKA KVATPSCQKT GGCPCGSSAP GKEYRSYPSN Q
001: MAPSSSSGLT FKLHPLVIVN ISDHYTRVKT QLNPPASICA SGHGSNNGEA MFQQNPRVYG CVIGVQRGRT VEIFNSFELL YDPSTQTLDR SFLEKKQELY
101: KKVFPDFYIL GWYSTGSDAE ESDMHIHKAL MDINESPVYV LLNPAINHTQ KDLPVTIYES ELHVIDGIPQ LIFAHTSYTI ETVEAERISV DHVAHLKPSD
201: GGSAATQLAA HLTGIHSAIK MLNSRIRVLY QNLAAMQKGD KSCDNSVLRQ VSSLLRRLPA MESERFQDNF LMEYNDKLLI TYLAMITNCS SNMNEMVDKF
301: NTAYDRNTRR GGRTAFM
101: KKVFPDFYIL GWYSTGSDAE ESDMHIHKAL MDINESPVYV LLNPAINHTQ KDLPVTIYES ELHVIDGIPQ LIFAHTSYTI ETVEAERISV DHVAHLKPSD
201: GGSAATQLAA HLTGIHSAIK MLNSRIRVLY QNLAAMQKGD KSCDNSVLRQ VSSLLRRLPA MESERFQDNF LMEYNDKLLI TYLAMITNCS SNMNEMVDKF
301: NTAYDRNTRR GGRTAFM
Arabidopsis Description
CSN6ACSN6A [Source:UniProtKB/TrEMBL;Acc:A0A178UD14]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.