Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid, mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G012380.1 | Barley | cytosol | 7.37 | 7.45 |
| HORVU2Hr1G110590.1 | Barley | cytosol | 21.05 | 6.45 |
| HORVU7Hr1G049190.1 | Barley | plastid | 22.11 | 6.23 |
| HORVU6Hr1G014610.1 | Barley | plastid | 14.74 | 4.5 |
| Os12t0622900-01 | Rice | cytosol | 15.79 | 3.01 |
| TraesCS3A01G162000.1 | Wheat | cytosol, plastid | 13.68 | 2.2 |
| Os12t0621900-02 | Rice | plastid | 12.63 | 2.19 |
| TraesCS1D01G370500.1 | Wheat | cytosol | 10.53 | 2.18 |
Protein Annotations
| Gene3D:3.40.140.10 | MapMan:35.1 | UniProt:A0A287JFC4 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005838 | EnsemblPlantsGene:HORVU2Hr1G110670 | EnsemblPlants:HORVU2Hr1G110670.1 |
| InterPro:IPR037518 | InterPro:JAMM/MPN+_dom | InterPro:MPN | InterPro:MPN_RPN7_8 | PFAM:PF01398 | PFscan:PS50249 |
| PANTHER:PTHR10540 | PANTHER:PTHR10540:SF7 | UniParc:UPI000B4661DA | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr2H:-:720479025..720479313
Molecular Weight (calculated)
10036.3 Da
IEP (calculated)
12.551
GRAVY (calculated)
-0.301
Length
95 amino acids
Sequence
(BLAST)
(BLAST)
1: XXXXXRSSRR SRHAAAAVRR RSAAARARVL RRRRGEEMDV VKAAQLSGRT LEKVVVHPLV LLSIVDHYNR VARDTRKRVV GVLLGTSSRG VVDVT
001: MDVIKTQQIS ARTIEKVVVH PLVLLSIVDH YNRVAKDSSK RVVGVLLGSS SRGVVDVTNS YAVPFEEDDK DPSIWFLDHN YHESMFHMFK RINAKEHVVG
101: WYSTGPKLRE NDLDVHALFN GYVPNPVLVI IDVQPKELGI PTKAYYAVEE NATQKSQKVF VHVSTEIAAH EVEEIGVEHL LRDVKDTTIS TLATEVTAKL
201: TALKGLDARL REIRSYLDLV IEGKLPLNHE ILYHLQDVFN LLPNLNVNEL VKAFSVKTND MMLVIYLSSL IRSVIALHNL INNKLLNKEH EKAEDSKPVA
301: IPATS
101: WYSTGPKLRE NDLDVHALFN GYVPNPVLVI IDVQPKELGI PTKAYYAVEE NATQKSQKVF VHVSTEIAAH EVEEIGVEHL LRDVKDTTIS TLATEVTAKL
201: TALKGLDARL REIRSYLDLV IEGKLPLNHE ILYHLQDVFN LLPNLNVNEL VKAFSVKTND MMLVIYLSSL IRSVIALHNL INNKLLNKEH EKAEDSKPVA
301: IPATS
Arabidopsis Description
RPN8A26S proteasome non-ATPase regulatory subunit 7 homolog A [Source:UniProtKB/Swiss-Prot;Acc:O24412]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.