Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G110670.1 | Barley | cytosol, mitochondrion, plastid | 2.18 | 10.53 |
| TraesCS6D01G078000.1 | Wheat | plastid | 4.14 | 6.51 |
| TraesCS2D01G496100.2 | Wheat | cytosol | 3.92 | 5.81 |
| TraesCS3A01G162000.1 | Wheat | cytosol, plastid | 4.79 | 3.72 |
| TraesCS7D01G240300.1 | Wheat | golgi, unclear | 2.61 | 3.56 |
| Os12t0622900-01 | Rice | cytosol | 3.05 | 2.81 |
| Os12t0621900-02 | Rice | plastid | 3.27 | 2.73 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G370500.1 | EnsemblPlantsGene:TraesCS1D01G370500 | PANTHER:PTHR10894 | PANTHER:PTHR10894:SF10 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr1D:+:449233383..449237578
Molecular Weight (calculated)
52931.3 Da
IEP (calculated)
6.135
GRAVY (calculated)
-0.159
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLLETPSGF GMFLVKDFVF KEEKNNIWVL FSDPEYAIQA LVALGFRKVD DRSIARNRNK GPGKDLMSLI KKFCKKGEEL IVQDKELKAS VEKRLKITCI
101: CDGYTVGELM WGIKNVLHKF IYEERCNTTP EYCLPVSEGL QEALQYYLVN IPPTKLDRAF VSNFGFLRYL DLNVEAFPKE LSRSFDEYVG IGETVKDSLD
201: YVKVLASVLV PELVEKYGFS KTFSPELVSK LHQAKIHQAE RGDDLTMDDI KKIMGVLDYL LNVPERRNKI LMDVKLMEAT FFRSHLSELR KAEETVDFDN
301: MEFRRALLQT PSGFAIFNVR EDVFTSPREI VFALGFIRVD NSIVRDSVIG PGGKLRQLIL RFCKANEELV VQDAELKAVI ESKLGVKCWT GDEAVDELFW
401: GIKHFLSDFI PEEKDKLTDE YFSPLSKQLL RDLETYKINI SPSKIWNGFI RWKWLALLK
101: CDGYTVGELM WGIKNVLHKF IYEERCNTTP EYCLPVSEGL QEALQYYLVN IPPTKLDRAF VSNFGFLRYL DLNVEAFPKE LSRSFDEYVG IGETVKDSLD
201: YVKVLASVLV PELVEKYGFS KTFSPELVSK LHQAKIHQAE RGDDLTMDDI KKIMGVLDYL LNVPERRNKI LMDVKLMEAT FFRSHLSELR KAEETVDFDN
301: MEFRRALLQT PSGFAIFNVR EDVFTSPREI VFALGFIRVD NSIVRDSVIG PGGKLRQLIL RFCKANEELV VQDAELKAVI ESKLGVKCWT GDEAVDELFW
401: GIKHFLSDFI PEEKDKLTDE YFSPLSKQLL RDLETYKINI SPSKIWNGFI RWKWLALLK
001: MVLVLYETAA GFALFKVKDE GKMANVEDLC KEFDTPDSAR KMVKLKAFEK FDNTSEALEA VAKLLEGAPS KGLRKFLKAN CQGETLAVAD SKLGNVIKEK
101: LKIDCIHNNA VMELLRGVRS QFTELISGLG DQDLAPMSLG LSHSLARYKL KFSSDKVDTM IIQAIGLLDD LDKELNTYAM RVREWYGWHF PELAKIISDN
201: ILYAKSVKLM GNRVNAAKLD FSEILADEIE ADLKDAAVIS MGTEVSDLDL LHIRELCDQV LSLSEYRAQL YDYLKSRMNT IAPNLTALVG ELVGARLISH
301: GGSLLNLSKQ PGSTVQILGA EKALFRALKT KHATPKYGLI FHASLVGQAA PKHKGKISRS LAAKTVLAIR VDALGDSQDN TMGLENRAKL EARLRNLEGK
401: DLGRLSGSSK GKPKIEVYNK DKKMGSGGLI TPAKTYNTAA DSLLGETSAK SEEPSKKKDK KKKKKVEEEK PEEEEPSEKK KKKKAEAETE AVVEVAKEEK
501: KKNKKKRKHE EEETTETPAK KKDKKEKKKK SKD
101: LKIDCIHNNA VMELLRGVRS QFTELISGLG DQDLAPMSLG LSHSLARYKL KFSSDKVDTM IIQAIGLLDD LDKELNTYAM RVREWYGWHF PELAKIISDN
201: ILYAKSVKLM GNRVNAAKLD FSEILADEIE ADLKDAAVIS MGTEVSDLDL LHIRELCDQV LSLSEYRAQL YDYLKSRMNT IAPNLTALVG ELVGARLISH
301: GGSLLNLSKQ PGSTVQILGA EKALFRALKT KHATPKYGLI FHASLVGQAA PKHKGKISRS LAAKTVLAIR VDALGDSQDN TMGLENRAKL EARLRNLEGK
401: DLGRLSGSSK GKPKIEVYNK DKKMGSGGLI TPAKTYNTAA DSLLGETSAK SEEPSKKKDK KKKKKVEEEK PEEEEPSEKK KKKKAEAETE AVVEVAKEEK
501: KKNKKKRKHE EEETTETPAK KKDKKEKKKK SKD
Arabidopsis Description
NOP5-2Probable nucleolar protein 5-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAB3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.