Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d026129_P001 | Maize | nucleus | 82.86 | 88.5 |
| Os04t0563700-01 | Rice | mitochondrion | 68.35 | 74.05 |
| TraesCS2A01G404800.1 | Wheat | nucleus | 65.49 | 73.58 |
| TraesCS2B01G422800.1 | Wheat | nucleus | 65.27 | 72.62 |
| TraesCS2D01G401700.1 | Wheat | nucleus, plastid | 65.49 | 70.78 |
| PGSC0003DMT400075380 | Potato | nucleus | 35.38 | 67.93 |
| CDY31481 | Canola | nucleus | 31.21 | 65.44 |
| GSMUA_Achr5P19270_001 | Banana | cytosol | 30.99 | 64.98 |
| HORVU2Hr1G096070.2 | Barley | nucleus | 64.62 | 62.42 |
| GSMUA_Achr11P... | Banana | nucleus | 50.33 | 56.13 |
| GSMUA_Achr8P13320_001 | Banana | nucleus | 51.43 | 55.71 |
| GSMUA_Achr5P19110_001 | Banana | nucleus | 51.21 | 54.95 |
| Solyc04g082430.2.1 | Tomato | nucleus | 45.71 | 52.93 |
| VIT_18s0001g14170.t01 | Wine grape | nucleus | 51.21 | 52.83 |
| Zm00001d036360_P002 | Maize | nucleus | 49.01 | 52.59 |
| KRH28901 | Soybean | nucleus | 49.45 | 51.96 |
| CDY33634 | Canola | nucleus | 46.59 | 51.96 |
| Bra016460.1-P | Field mustard | nucleus | 46.81 | 51.95 |
| CDX96631 | Canola | nucleus | 46.59 | 51.71 |
| KRH76553 | Soybean | nucleus | 49.01 | 51.62 |
| CDX85942 | Canola | nucleus | 46.15 | 51.47 |
| Bra003727.1-P | Field mustard | nucleus | 43.3 | 51.44 |
| VIT_03s0038g02800.t01 | Wine grape | nucleus, plastid | 47.91 | 51.42 |
| AT1G20610.1 | Thale cress | nucleus | 47.91 | 50.82 |
| CDY67210 | Canola | nucleus | 45.27 | 50.74 |
| Bra025831.1-P | Field mustard | nucleus | 45.71 | 50.73 |
| PGSC0003DMT400093973 | Potato | nucleus | 36.7 | 50.61 |
| Bra017726.1-P | Field mustard | nucleus | 45.05 | 50.49 |
| CDX72551 | Canola | nucleus | 44.4 | 50.37 |
| Zm00001d019469_P001 | Maize | extracellular | 15.82 | 50.35 |
| Solyc02g061650.1.1 | Tomato | nucleus | 38.68 | 50.14 |
| PGSC0003DMT400025854 | Potato | nucleus | 48.57 | 50.11 |
| PGSC0003DMT400048062 | Potato | nucleus | 47.25 | 49.88 |
| Solyc12g094600.1.1 | Tomato | nucleus | 46.59 | 49.88 |
| Bra015762.1-P | Field mustard | nucleus | 47.03 | 49.65 |
| Solyc03g032190.2.1 | Tomato | nucleus | 47.03 | 49.65 |
| CDX88261 | Canola | nucleus | 46.81 | 49.53 |
| CDY29520 | Canola | nucleus | 44.62 | 49.51 |
| PGSC0003DMT400003868 | Potato | nucleus | 47.03 | 49.42 |
| CDX87612 | Canola | nucleus | 46.81 | 49.42 |
| CDX68105 | Canola | nucleus | 42.86 | 49.37 |
| AT1G20590.1 | Thale cress | cytosol, golgi, nucleus, plastid | 28.57 | 49.06 |
| AT4G35620.1 | Thale cress | nucleus | 46.15 | 48.95 |
| KRH60628 | Soybean | nucleus | 43.3 | 48.64 |
| CDY07838 | Canola | nucleus | 44.62 | 48.56 |
| CDY29184 | Canola | nucleus | 44.62 | 48.45 |
| Bra024504.1-P | Field mustard | nucleus | 44.62 | 48.45 |
| Solyc02g082820.2.1 | Tomato | nucleus | 46.15 | 48.39 |
| KRH51329 | Soybean | nucleus, plastid | 43.96 | 48.19 |
| CDY26816 | Canola | nucleus | 43.08 | 48.16 |
| AT1G76310.3 | Thale cress | nucleus | 48.57 | 48.15 |
| CDY30357 | Canola | nucleus | 42.86 | 47.68 |
| Bra037265.1-P | Field mustard | nucleus | 42.64 | 47.43 |
| AT2G17620.1 | Thale cress | nucleus | 44.4 | 47.09 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, vacuole | 52.97 | 36.08 |
| Zm00001d012560_P002 | Maize | nucleus, plastid | 34.07 | 34.52 |
| Zm00001d008221_P001 | Maize | nucleus | 34.07 | 32.36 |
| Zm00001d043164_P002 | Maize | nucleus | 33.63 | 31.61 |
| Zm00001d010656_P001 | Maize | nucleus | 29.67 | 30.27 |
| Zm00001d020033_P001 | Maize | nucleus | 33.41 | 27.94 |
| Zm00001d020996_P001 | Maize | nucleus | 32.53 | 27.21 |
| Zm00001d033365_P002 | Maize | nucleus | 22.2 | 27.15 |
| Zm00001d032128_P001 | Maize | cytosol | 9.23 | 26.58 |
| Zm00001d013744_P001 | Maize | nucleus | 20.0 | 25.49 |
| Zm00001d014756_P006 | Maize | nucleus, plastid | 27.69 | 24.18 |
| Zm00001d030849_P001 | Maize | nucleus | 22.2 | 23.88 |
| Zm00001d041334_P001 | Maize | nucleus, plastid | 21.98 | 22.88 |
| Zm00001d023732_P002 | Maize | mitochondrion, nucleus, plastid | 23.74 | 22.27 |
| Zm00001d021353_P002 | Maize | mitochondrion, nucleus | 9.45 | 21.5 |
| Zm00001d040381_P001 | Maize | plastid | 24.4 | 20.83 |
| Zm00001d010404_P001 | Maize | nucleus | 21.98 | 20.62 |
| Zm00001d009011_P001 | Maize | nucleus, plastid | 20.88 | 18.63 |
| Zm00001d048127_P001 | Maize | plastid | 18.68 | 17.75 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | UniProt:A0A1D6E383 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom |
| InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | ProteinID:ONM14999.1 |
| PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF350 | SMART:SM00385 |
| SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI0008430F3D | EnsemblPlantsGene:Zm00001d002662 | EnsemblPlants:Zm00001d002662_P010 | EnsemblPlants:Zm00001d002662_T010 |
| SEG:seg | : | : | : | : | : |
Description
cyclin8 cyclin8
Coordinates
chr2:+:18694079..18697258
Molecular Weight (calculated)
50638.2 Da
IEP (calculated)
5.750
GRAVY (calculated)
-0.186
Length
455 amino acids
Sequence
(BLAST)
(BLAST)
001: MAARAADENR RPAAGKPAPG VRGGCGRPRL ISSCIVCCVA SPCLHGSDLL ICADMASRRA LTDIKNLVGA APYPYAVAKK PMLQKSKRDE KQPALASSRP
101: MTRKFAASLA SKGQPECQPI VADPEPEVCQ QKESVGDGTV DIDVELYELV DGSDSDIDMG ATENKDIMNE DELLMDIDSA DSGNPLAATE YVKELYTFYR
201: ENEAKSCVRP DYMSSQQDIN SKMRAILIDW LIEVHYKFEL MDETLFLMVN IIDRFLEKEV VPRKKLQLVG VTAMLLACKY EEVSVPVVED LVLISDRAYT
301: KGQILEMEKL ILNTLQFNMS VPTPYVFMKR FLKAADADKQ LELASFFMLE LCLVEYQMLN YRPSHLAAAA VYTAQCAINR CQHWTKVCES HSRYTSDQLL
401: ECSRMMVDFH QKAGTSKLTG VHRKYSTYKF GCVAKILPAQ FLLESGGTPP PSGAN
101: MTRKFAASLA SKGQPECQPI VADPEPEVCQ QKESVGDGTV DIDVELYELV DGSDSDIDMG ATENKDIMNE DELLMDIDSA DSGNPLAATE YVKELYTFYR
201: ENEAKSCVRP DYMSSQQDIN SKMRAILIDW LIEVHYKFEL MDETLFLMVN IIDRFLEKEV VPRKKLQLVG VTAMLLACKY EEVSVPVVED LVLISDRAYT
301: KGQILEMEKL ILNTLQFNMS VPTPYVFMKR FLKAADADKQ LELASFFMLE LCLVEYQMLN YRPSHLAAAA VYTAQCAINR CQHWTKVCES HSRYTSDQLL
401: ECSRMMVDFH QKAGTSKLTG VHRKYSTYKF GCVAKILPAQ FLLESGGTPP PSGAN
001: MVRSDENSLG LIGSMSLQGG GVVGKIKTTA TTGPTRRALS TINKNITEAP SYPYAVNKRS VSERDGICNK PPVHRPVTRK FAAQLADHKP HIRDEETKKP
101: DSVSSEEPET IIIDVDESDK EGGDSNEPMF VQHTEAMLEE IEQMEKEIEM EDADKEEEPV IDIDACDKNN PLAAVEYIHD MHTFYKNFEK LSCVPPNYMD
201: NQQDLNERMR GILIDWLIEV HYKFELMEET LYLTINVIDR FLAVHQIVRK KLQLVGVTAL LLACKYEEVS VPVVDDLILI SDKAYSRREV LDMEKLMANT
301: LQFNFSLPTP YVFMKRFLKA AQSDKKLEIL SFFMIELCLV EYEMLEYLPS KLAASAIYTA QCTLKGFEEW SKTCEFHTGY NEKQLLACAR KMVAFHHKAG
401: TGKLTGVHRK YNTSKFCHAA RTEPAGFLI
101: DSVSSEEPET IIIDVDESDK EGGDSNEPMF VQHTEAMLEE IEQMEKEIEM EDADKEEEPV IDIDACDKNN PLAAVEYIHD MHTFYKNFEK LSCVPPNYMD
201: NQQDLNERMR GILIDWLIEV HYKFELMEET LYLTINVIDR FLAVHQIVRK KLQLVGVTAL LLACKYEEVS VPVVDDLILI SDKAYSRREV LDMEKLMANT
301: LQFNFSLPTP YVFMKRFLKA AQSDKKLEIL SFFMIELCLV EYEMLEYLPS KLAASAIYTA QCTLKGFEEW SKTCEFHTGY NEKQLLACAR KMVAFHHKAG
401: TGKLTGVHRK YNTSKFCHAA RTEPAGFLI
Arabidopsis Description
CYCB2-3Cyclin-B2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.