Factsheet for PGSC0003DMT400003868

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g082820.2.1	Tomato	nucleus	95.84	95.62
PGSC0003DMT400048062	Potato	nucleus	75.75	76.1
PGSC0003DMT400075380	Potato	nucleus	36.95	67.51
KRH76553	Soybean	nucleus	65.36	65.51
KRH28901	Soybean	nucleus	64.9	64.9
PGSC0003DMT400093973	Potato	nucleus	48.5	63.64
GSMUA_Achr5P19270_001	Banana	cytosol	30.25	60.37
PGSC0003DMT400025854	Potato	nucleus	57.74	56.69
GSMUA_Achr11P...	Banana	nucleus	53.12	56.37
GSMUA_Achr5P19110_001	Banana	nucleus	54.73	55.9
GSMUA_Achr8P13320_001	Banana	nucleus	54.04	55.71
Os06t0726800-01	Rice	nucleus	53.35	55.13
KXG20945	Sorghum	nucleus	52.66	53.77
Zm00001d036360_P002	Maize	nucleus	51.73	52.83
Os04t0563700-01	Rice	mitochondrion	51.04	52.62
HORVU7Hr1G121820.6	Barley	nucleus	50.81	52.38
TraesCS2B01G422800.1	Wheat	nucleus	49.42	52.32
TraesCS2A01G404800.1	Wheat	nucleus	48.73	52.1
TraesCS7B01G472800.1	Wheat	nucleus	50.12	51.79
TraesCS7D01G536000.1	Wheat	nucleus	49.88	51.55
TraesCS7A01G549500.1	Wheat	nucleus	49.88	51.55
TraesCS2D01G401700.1	Wheat	nucleus, plastid	49.42	50.83
HORVU0Hr1G022770.1	Barley	nucleus, plastid	32.33	50.36
Zm00001d026129_P001	Maize	nucleus	49.42	50.23
EES12664	Sorghum	nucleus	49.42	49.54
Zm00001d002662_P010	Maize	nucleus	49.42	47.03
HORVU2Hr1G096070.2	Barley	nucleus	49.19	45.22
PGSC0003DMT400058457	Potato	nucleus	34.87	36.12
PGSC0003DMT400015245	Potato	nucleus	36.26	35.76
GSMUA_Achr11P...	Banana	endoplasmic reticulum, vacuole	54.97	35.63
PGSC0003DMT400018480	Potato	nucleus	34.87	35.53
PGSC0003DMT400072211	Potato	nucleus	36.72	34.27
PGSC0003DMT400055428	Potato	nucleus	26.1	30.71
PGSC0003DMT400030222	Potato	nucleus	24.94	30.51
PGSC0003DMT400030176	Potato	nucleus	24.48	29.78
PGSC0003DMT400056625	Potato	nucleus	23.79	27.11
PGSC0003DMT400006576	Potato	nucleus	27.94	26.13
PGSC0003DMT400015424	Potato	plastid	27.48	25.21
PGSC0003DMT400067117	Potato	plastid	27.48	23.94

Protein Annotations

Gene3D:1.10.472.10	EntrezGene:102591724	MapMan:13.1.1.1.2	InterPro:Cyclin-like	InterPro:Cyclin-like_sf	InterPro:Cyclin_C-dom
InterPro:Cyclin_N	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	UniProt:M0ZMF7
PFAM:PF00134	PFAM:PF02984	EnsemblPlantsGene:PGSC0003DMG400001523	PGSC:PGSC0003DMG400001523	EnsemblPlants:PGSC0003DMT400003868	PIRSF:PIRSF001771
ScanProsite:PS00292	PANTHER:PTHR10177	PANTHER:PTHR10177:SF261	SMART:SM00385	SMART:SM01332	SUPFAM:SSF47954
UniParc:UPI00029653F5	RefSeq:XP_006340828.1	SEG:seg	:	:	:

Description

Cyclin B2 [Source:PGSC_GENE;Acc:PGSC0003DMG400001523]

Coordinates

chr2:+:38645736..38648928

Molecular Weight (calculated)

49024.1 Da

IEP (calculated)

5.863

GRAVY (calculated)

-0.288

Length

433 amino acids

Sequence
(BLAST)

001: MAITDENKPA LIKPSAVQVK GGAEMATRKV VGVETRSNRR VLGAINQNLV GGQGYPCVVN KRGLSDENGI CDKNLPVHGH RPITRKYAAQ IASSQKHSSE
101: ENKKPKIAAE SFSVWEDDME ENEAANDKPV PMSLEQTEKV SKGKDQMEVE MEDIFEEAVI DIDGDDAKNH LAAVEYVGDL FANYRTMEVY SCASPNYMAQ
201: QVDINERMRS ILIDWLIEVH HKFELREETL FLTVNLIDRF LEKQGIVRKK LQLVGLVAML LACKYEEVCA PLVEDLVLIS DKAYTRKEVL EMENMMLNTL
301: QFNMSVPTAY VFMRRYLKAA QCDRKLELLS FMLVELCLVE YEMLKFPPSF IAAAAIYTAQ TTLYGVQQWS KTCEVHTTYS EDQLLECSRS IVGYHQKAAT
401: GKLTGVHRKY SISKFGYSAK CEPAHFLVQQ TQQ

Best Arabidopsis Sequence Match ( AT1G20610.1 )
(BLAST)

001: MVRSDENSLG LIGSMSLQGG GVVGKIKTTA TTGPTRRALS TINKNITEAP SYPYAVNKRS VSERDGICNK PPVHRPVTRK FAAQLADHKP HIRDEETKKP
101: DSVSSEEPET IIIDVDESDK EGGDSNEPMF VQHTEAMLEE IEQMEKEIEM EDADKEEEPV IDIDACDKNN PLAAVEYIHD MHTFYKNFEK LSCVPPNYMD
201: NQQDLNERMR GILIDWLIEV HYKFELMEET LYLTINVIDR FLAVHQIVRK KLQLVGVTAL LLACKYEEVS VPVVDDLILI SDKAYSRREV LDMEKLMANT
301: LQFNFSLPTP YVFMKRFLKA AQSDKKLEIL SFFMIELCLV EYEMLEYLPS KLAASAIYTA QCTLKGFEEW SKTCEFHTGY NEKQLLACAR KMVAFHHKAG
401: TGKLTGVHRK YNTSKFCHAA RTEPAGFLI

Arabidopsis Description

CYCB2-3Cyclin-B2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDM4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.