Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P13320_001 | Banana | nucleus | 77.21 | 75.0 |
| GSMUA_Achr5P19110_001 | Banana | nucleus | 76.23 | 73.35 |
| GSMUA_Achr5P19270_001 | Banana | cytosol | 38.24 | 71.89 |
| PGSC0003DMT400075380 | Potato | nucleus | 41.67 | 71.73 |
| CDY31481 | Canola | nucleus | 37.5 | 70.51 |
| Os06t0726800-01 | Rice | nucleus | 62.5 | 60.86 |
| KXG20945 | Sorghum | nucleus | 61.52 | 59.2 |
| HORVU0Hr1G022770.1 | Barley | nucleus, plastid | 40.2 | 58.99 |
| Solyc04g082430.2.1 | Tomato | nucleus | 56.37 | 58.52 |
| HORVU7Hr1G121820.6 | Barley | nucleus | 59.8 | 58.1 |
| TraesCS7B01G472800.1 | Wheat | nucleus | 59.56 | 58.0 |
| TraesCS7D01G536000.1 | Wheat | nucleus | 59.31 | 57.76 |
| TraesCS7A01G549500.1 | Wheat | nucleus | 59.31 | 57.76 |
| Zm00001d036360_P002 | Maize | nucleus | 59.31 | 57.08 |
| Os04t0563700-01 | Rice | mitochondrion | 58.58 | 56.9 |
| VIT_03s0038g02800.t01 | Wine grape | nucleus, plastid | 58.58 | 56.37 |
| VIT_18s0001g14170.t01 | Wine grape | nucleus | 60.78 | 56.24 |
| KRH60628 | Soybean | nucleus | 55.15 | 55.56 |
| TraesCS2A01G404800.1 | Wheat | nucleus | 55.15 | 55.56 |
| KRH76553 | Soybean | nucleus | 58.33 | 55.09 |
| TraesCS2B01G422800.1 | Wheat | nucleus | 55.15 | 55.01 |
| CDY33634 | Canola | nucleus | 54.9 | 54.9 |
| CDX96631 | Canola | nucleus | 55.15 | 54.88 |
| Bra016460.1-P | Field mustard | nucleus | 55.15 | 54.88 |
| Solyc03g032190.2.1 | Tomato | nucleus | 57.84 | 54.76 |
| PGSC0003DMT400048062 | Potato | nucleus | 57.6 | 54.52 |
| KRH28901 | Soybean | nucleus | 57.84 | 54.5 |
| KRH51329 | Soybean | nucleus, plastid | 55.39 | 54.46 |
| Bra003727.1-P | Field mustard | nucleus | 50.98 | 54.31 |
| CDX85942 | Canola | nucleus | 54.17 | 54.17 |
| Solyc12g094600.1.1 | Tomato | nucleus | 56.37 | 54.12 |
| Bra025831.1-P | Field mustard | nucleus | 54.17 | 53.9 |
| PGSC0003DMT400025854 | Potato | nucleus | 57.84 | 53.51 |
| TraesCS2D01G401700.1 | Wheat | nucleus, plastid | 55.15 | 53.44 |
| AT1G20610.1 | Thale cress | nucleus | 56.13 | 53.38 |
| EES12664 | Sorghum | nucleus | 56.37 | 53.24 |
| Solyc02g082820.2.1 | Tomato | nucleus | 56.62 | 53.23 |
| PGSC0003DMT400003868 | Potato | nucleus | 56.37 | 53.12 |
| Zm00001d026129_P001 | Maize | nucleus | 55.39 | 53.05 |
| CDY29520 | Canola | nucleus | 53.19 | 52.93 |
| CDX68105 | Canola | nucleus | 50.98 | 52.66 |
| AT1G20590.1 | Thale cress | cytosol, golgi, nucleus, plastid | 34.07 | 52.45 |
| Bra015762.1-P | Field mustard | nucleus | 54.9 | 51.97 |
| CDX87612 | Canola | nucleus | 54.66 | 51.74 |
| CDX88261 | Canola | nucleus | 54.41 | 51.63 |
| PGSC0003DMT400093973 | Potato | nucleus | 41.67 | 51.52 |
| CDX72551 | Canola | nucleus | 50.49 | 51.37 |
| Bra024504.1-P | Field mustard | nucleus | 52.45 | 51.07 |
| CDY29184 | Canola | nucleus | 52.45 | 51.07 |
| Bra017726.1-P | Field mustard | nucleus | 50.74 | 50.99 |
| CDY67210 | Canola | nucleus | 50.74 | 50.99 |
| CDY07838 | Canola | nucleus | 51.96 | 50.72 |
| Zm00001d002662_P010 | Maize | nucleus | 56.13 | 50.33 |
| Solyc02g061650.1.1 | Tomato | nucleus | 43.14 | 50.14 |
| CDY30357 | Canola | nucleus | 50.25 | 50.12 |
| AT4G35620.1 | Thale cress | nucleus | 52.7 | 50.12 |
| AT1G76310.3 | Thale cress | nucleus | 56.13 | 49.89 |
| Bra037265.1-P | Field mustard | nucleus | 50.0 | 49.88 |
| AT2G17620.1 | Thale cress | nucleus | 52.21 | 49.65 |
| CDY26816 | Canola | nucleus | 49.51 | 49.63 |
| HORVU2Hr1G096070.2 | Barley | nucleus | 55.39 | 47.98 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, vacuole | 72.3 | 44.16 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.64 | 41.95 |
| GSMUA_Achr4P10090_001 | Banana | nucleus | 38.97 | 37.41 |
| GSMUA_Achr8P23970_001 | Banana | nucleus | 38.24 | 35.86 |
| GSMUA_Achr3P24980_001 | Banana | nucleus | 35.29 | 35.82 |
| GSMUA_Achr10P... | Banana | nucleus | 39.46 | 35.54 |
| GSMUA_Achr7P21380_001 | Banana | nucleus | 39.46 | 35.23 |
| GSMUA_Achr2P21530_001 | Banana | cytosol, nucleus, plastid | 22.3 | 31.82 |
| GSMUA_Achr1P14000_001 | Banana | nucleus, plasma membrane, plastid | 19.12 | 31.58 |
| GSMUA_Achr10P... | Banana | nucleus | 24.02 | 30.91 |
| GSMUA_Achr6P11130_001 | Banana | nucleus | 25.98 | 27.11 |
| GSMUA_Achr2P21520_001 | Banana | nucleus | 22.79 | 25.83 |
| GSMUA_Achr2P19220_001 | Banana | nucleus, plastid | 28.19 | 22.91 |
| GSMUA_Achr5P06960_001 | Banana | nucleus, plastid | 27.94 | 22.8 |
| GSMUA_Achr3P25340_001 | Banana | nucleus | 25.98 | 19.56 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSMUA_Achr11G22430_001 | EnsemblPlants:GSMUA_Achr11P22430_001 |
| EnsemblPlants:GSMUA_Achr11T22430_001 | UniProt:M0RUH3 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | PANTHER:PTHR10177 |
| PANTHER:PTHR10177:SF350 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI000296E907 | SEG:seg |
Description
Cyclin-B2-2 [Source:GMGC_GENE;Acc:GSMUA_Achr11G22430_001]
Coordinates
chr11:+:22721683..22724108
Molecular Weight (calculated)
46377.9 Da
IEP (calculated)
5.021
GRAVY (calculated)
-0.103
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDRRALRDI RNLVGAPSYA CAVKKTGLTD NGSSDDKNPT FVARLPVTRN FAATVASKSQ PDQQVLFMKL HHQSHCKPPA PSMSSSSCPD SSSAVDVDDY
101: SLSNDIASPM VEEKEEMDNS NLREVEMEDL VIETIPDIDG CDLDNPLAVV EYVEDIYTFY RKTEVTSCVR PDYMPHQFDI NEKMRAILID WLIEVHYKFE
201: LMDETLFLTA NIIDRFLASQ TVVRKKLQLV GVTAMFLACK YEEVSVPVVE DLILICDRAY TKEELLEMER LIINTLQFNM SVATPYVFMR RFLKAADSDK
301: KLELLSFFII ELCLVEYKML EFRPSLLAAA AIYTAQCSLR GFRYWTKTCE LHTTYSEDQL LECSRLMVDF HHKAGVGKLT GVHRKYSTFK YGCAAKAEPA
401: LFLLNASL
101: SLSNDIASPM VEEKEEMDNS NLREVEMEDL VIETIPDIDG CDLDNPLAVV EYVEDIYTFY RKTEVTSCVR PDYMPHQFDI NEKMRAILID WLIEVHYKFE
201: LMDETLFLTA NIIDRFLASQ TVVRKKLQLV GVTAMFLACK YEEVSVPVVE DLILICDRAY TKEELLEMER LIINTLQFNM SVATPYVFMR RFLKAADSDK
301: KLELLSFFII ELCLVEYKML EFRPSLLAAA AIYTAQCSLR GFRYWTKTCE LHTTYSEDQL LECSRLMVDF HHKAGVGKLT GVHRKYSTFK YGCAAKAEPA
401: LFLLNASL
001: MGGSDENRHG VIGPMNRQQG GLRGGKVIPT NGQTRRALSN INKNIIGAPV YPCAVKRPFT EKNGICNKKI PPVPVHRPVT RKFAAQLAEN NLQIHKEETK
101: KPDLISNEAL DRIITDVEEG DFNEPMFVQH TEAMLEEIDK MEGIEMQDSN DIDAEVEESV MDIDSCDKNN PLSVVEYIND IYCFYKKNEC RSCVPPNYME
201: NQHDINERMR GILFDWLIEV HYKFELMEET LYLTINLIDR FLAVHQHIAR KKLQLVGVTA MLLACKYEEV SVPVVDDLIL ISDKAYTRTE ILDMEKLMAN
301: TLQFNFCLPT PYVFMRRFLK AAQSDKKLEL LSFFMIELCL VEYEMLQYTP SQLAASAIYT AQSTLKGYED WSKTSEFHSG YTEEALLECS RKMVGLHHKA
401: GTGKLTGVHR KYNTSKFGYA ARIEPAGFLL L
101: KPDLISNEAL DRIITDVEEG DFNEPMFVQH TEAMLEEIDK MEGIEMQDSN DIDAEVEESV MDIDSCDKNN PLSVVEYIND IYCFYKKNEC RSCVPPNYME
201: NQHDINERMR GILFDWLIEV HYKFELMEET LYLTINLIDR FLAVHQHIAR KKLQLVGVTA MLLACKYEEV SVPVVDDLIL ISDKAYTRTE ILDMEKLMAN
301: TLQFNFCLPT PYVFMRRFLK AAQSDKKLEL LSFFMIELCL VEYEMLQYTP SQLAASAIYT AQSTLKGYED WSKTSEFHSG YTEEALLECS RKMVGLHHKA
401: GTGKLTGVHR KYNTSKFGYA ARIEPAGFLL L
Arabidopsis Description
CYCB2;4CYCLIN B2;4 [Source:TAIR;Acc:AT1G76310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.