Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr4P20560_001 | |
| GSMUA_Achr7P05020_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G38480.1 | GSMUA_Achr4P20560_001 | AT2G18876.1 | 21798944 |
| AT5G38480.1 | GSMUA_Achr7P05020_001 | AT2G18876.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol | 94.66 | 93.94 |
| GSMUA_Achr7P10320_001 | Banana | cytosol | 93.13 | 92.42 |
| GSMUA_Achr2P16070_001 | Banana | cytosol | 93.13 | 92.42 |
| GSMUA_Achr9P28460_001 | Banana | cytosol | 92.37 | 91.67 |
| GSMUA_Achr5P23090_001 | Banana | cytosol | 92.37 | 91.67 |
| GSMUA_Achr6P05260_001 | Banana | cytosol | 90.84 | 90.15 |
| GSMUA_Achr10P... | Banana | cytosol | 90.08 | 90.08 |
| GSMUA_Achr6P10320_001 | Banana | cytosol | 81.68 | 82.95 |
| GSMUA_Achr10P... | Banana | cytosol | 80.92 | 82.17 |
| GSMUA_Achr10P... | Banana | cytosol | 79.39 | 80.0 |
| GSMUA_Achr7P19110_001 | Banana | cytosol | 81.68 | 54.87 |
| GSMUA_Achr4P30650_001 | Banana | plasma membrane | 91.6 | 51.95 |
| GSMUA_Achr10P... | Banana | cytosol | 80.92 | 51.71 |
| VIT_14s0006g03230.t01 | Wine grape | cytosol | 91.6 | 45.8 |
| KRH01783 | Soybean | nucleus | 89.31 | 45.53 |
| Solyc03g034180.2.1 | Tomato | cytosol | 89.31 | 45.35 |
| PGSC0003DMT400062153 | Potato | cytosol | 89.31 | 45.0 |
| Solyc02g063070.2.1 | Tomato | plastid | 88.55 | 44.62 |
| AT3G02520.2 | Thale cress | cytosol | 88.55 | 43.77 |
| CDY71290 | Canola | cytosol | 85.5 | 43.58 |
| CDY01659 | Canola | cytosol | 85.5 | 43.58 |
| Bra028187.1-P | Field mustard | cytosol | 85.5 | 43.58 |
| CDX74521 | Canola | cytosol | 85.5 | 43.58 |
| AT5G38480.1 | Thale cress | cytosol | 84.73 | 43.53 |
| Bra028409.1-P | Field mustard | cytosol | 85.5 | 43.41 |
| CDX67405 | Canola | cytosol | 85.5 | 43.41 |
| Bra040592.1-P | Field mustard | cytosol | 86.26 | 43.3 |
| CDY51543 | Canola | cytosol | 86.26 | 43.3 |
| CDX91996 | Canola | cytosol | 86.26 | 43.3 |
| Bra001049.1-P | Field mustard | cytosol | 86.26 | 43.3 |
| CDX74252 | Canola | cytosol | 86.26 | 43.3 |
| CDY28698 | Canola | cytosol | 85.5 | 42.91 |
| GSMUA_Achr3P06740_001 | Banana | cytosol | 70.99 | 41.89 |
| KRH46909 | Soybean | cytosol | 82.44 | 41.54 |
| AT5G16050.2 | Thale cress | cytosol | 84.73 | 41.42 |
| PGSC0003DMT400050389 | Potato | cytosol | 79.39 | 40.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 73.28 | 37.35 |
| GSMUA_Achr7P13910_001 | Banana | cytosol | 74.81 | 37.26 |
| GSMUA_Achr9P06440_001 | Banana | cytosol | 75.57 | 37.22 |
| GSMUA_Achr2P19330_001 | Banana | plasma membrane | 74.81 | 36.98 |
| GSMUA_Achr6P26860_001 | Banana | cytosol | 73.28 | 36.23 |
| GSMUA_Achr7P00550_001 | Banana | cytosol | 72.52 | 35.06 |
| GSMUA_Achr2P22240_001 | Banana | cytosol | 62.6 | 31.91 |
| GSMUA_Achr4P15130_001 | Banana | cytosol | 54.2 | 29.22 |
| GSMUA_Achr8P27280_001 | Banana | cytosol | 72.52 | 27.7 |
| GSMUA_Achr3P17880_001 | Banana | cytosol | 17.56 | 13.07 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP18060_001 | EnsemblPlants:GSMUA_AchrUn_randomT18060_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG18060_001 | Gene3D:1.20.190.20 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0019904 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain |
| InterPro:IPR036815 | PANTHER:PTHR18860 | PANTHER:PTHR18860:SF34 | PFAM:PF00244 | PRINTS:PR00305 | ScanProsite:PS00797 |
| SMART:SM00101 | SUPFAM:SSF48445 | UniParc:UPI000294C725 | UniProt:M0UA65 | MapMan:35.1 | : |
Description
14-3-3-like protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG18060_001]
Coordinates
chrchrUn_random:-:85287619..85292436
Molecular Weight (calculated)
14611.0 Da
IEP (calculated)
4.255
GRAVY (calculated)
-0.401
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGDYHRYLA EFKTGAERKE AAESTLSAYK SAQDIALAEL APTHPIRLGL ALNFSVFYYE IVNSPDRACS LAKQAFDEAI SELDTLSEES YKDSTLIMQL
101: LRDNLTLWTS DITEDAGDEI KEPLVRESGG Q
101: LRDNLTLWTS DITEDAGDEI KEPLVRESGG Q
001: MSSSREENVY LAKLAEQAER YEEMVEFMEK VAKTVDTDEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESRGNDD HVSIIKDYRG KIETELSKIC
101: DGILNLLDSH LVPTASLAES KVFYLKMKGD YHRYLAEFKT GAERKEAAES TLVAYKSAQD IALADLAPTH PIRLGLALNF SVFYYEILNS PDRACSLAKQ
201: AFDEAISELD TLGEESYKDS TLIMQLLRDN LTLWNSDIND EAGGDEIKEA SKHEPEEGKP AETGQ
101: DGILNLLDSH LVPTASLAES KVFYLKMKGD YHRYLAEFKT GAERKEAAES TLVAYKSAQD IALADLAPTH PIRLGLALNF SVFYYEILNS PDRACSLAKQ
201: AFDEAISELD TLGEESYKDS TLIMQLLRDN LTLWNSDIND EAGGDEIKEA SKHEPEEGKP AETGQ
Arabidopsis Description
GRF714-3-3-like protein GF14 nu [Source:UniProtKB/Swiss-Prot;Acc:Q96300]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.