Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- vacuole 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d013429_P001 | Maize | extracellular | 30.68 | 46.55 |
| GSMUA_Achr4P30650_001 | Banana | plasma membrane | 46.59 | 35.5 |
| KRH05108 | Soybean | cytosol | 30.11 | 33.33 |
| Bra008355.1-P | Field mustard | cytosol | 47.16 | 33.2 |
| PGSC0003DMT400041810 | Potato | cytosol | 48.3 | 32.95 |
| Bra035027.1-P | Field mustard | cytosol | 48.3 | 32.69 |
| Solyc04g012120.2.1 | Tomato | extracellular, nucleus | 47.16 | 32.55 |
| PGSC0003DMT400060654 | Potato | cytosol | 47.16 | 32.55 |
| AT1G78300.1 | Thale cress | cytosol | 47.73 | 32.43 |
| Bra034430.1-P | Field mustard | cytosol | 48.3 | 32.32 |
| CDY28408 | Canola | cytosol | 48.3 | 32.32 |
| CDX68022 | Canola | cytosol | 47.73 | 32.31 |
| CDX79255 | Canola | cytosol | 47.73 | 32.31 |
| CDX88436 | Canola | cytosol | 47.73 | 32.31 |
| Bra003649.1-P | Field mustard | cytosol | 47.16 | 31.92 |
| CDY14618 | Canola | cytosol | 47.16 | 31.92 |
| Solyc11g010200.1.1 | Tomato | nucleus | 48.3 | 31.6 |
| Bra028068.1-P | Field mustard | cytosol | 46.59 | 31.42 |
| CDY12024 | Canola | cytosol | 46.59 | 31.42 |
| CDX73313 | Canola | cytosol | 47.16 | 31.32 |
| GSMUA_AchrUn_... | Banana | cytosol | 45.45 | 31.13 |
| CDY41483 | Canola | cytosol | 44.32 | 30.12 |
| Bra016380.1-P | Field mustard | cytosol | 43.75 | 29.73 |
| CDX91676 | Canola | cytosol | 43.75 | 29.73 |
| GSMUA_Achr9P06440_001 | Banana | cytosol | 44.89 | 29.7 |
| GSMUA_Achr7P13910_001 | Banana | cytosol | 44.32 | 29.66 |
| GSMUA_Achr2P19330_001 | Banana | plasma membrane | 43.75 | 29.06 |
| CDY00447 | Canola | cytosol | 42.61 | 28.85 |
| CDY46646 | Canola | cytosol | 42.61 | 28.85 |
| AT1G35160.2 | Thale cress | cytosol | 48.3 | 28.81 |
| GSMUA_Achr6P26860_001 | Banana | cytosol | 43.18 | 28.68 |
| Bra012325.1-P | Field mustard | cytosol | 42.61 | 28.52 |
| CDX87455 | Canola | cytosol | 48.3 | 28.43 |
| GSMUA_Achr7P19110_001 | Banana | cytosol | 31.25 | 28.21 |
| GSMUA_Achr10P... | Banana | cytosol | 31.82 | 27.32 |
| GSMUA_Achr7P00550_001 | Banana | cytosol | 41.48 | 26.94 |
| GSMUA_Achr4P15130_001 | Banana | cytosol | 36.93 | 26.75 |
| AT4G09000.2 | Thale cress | cytosol | 47.73 | 26.42 |
| GSMUA_Achr3P06740_001 | Banana | cytosol | 32.95 | 26.13 |
| GSMUA_Achr2P22240_001 | Banana | cytosol | 38.07 | 26.07 |
| GSMUA_Achr8P27280_001 | Banana | cytosol | 43.18 | 22.16 |
| GSMUA_Achr6P10320_001 | Banana | cytosol | 13.07 | 17.83 |
| GSMUA_Achr10P... | Banana | cytosol | 13.07 | 17.83 |
| GSMUA_AchrUn_... | Banana | cytosol | 13.07 | 17.56 |
| GSMUA_AchrUn_... | Banana | cytosol | 13.07 | 17.42 |
| GSMUA_Achr5P23090_001 | Banana | cytosol | 13.07 | 17.42 |
| GSMUA_Achr10P... | Banana | cytosol | 12.5 | 16.92 |
| GSMUA_Achr10P... | Banana | cytosol | 12.5 | 16.79 |
| GSMUA_Achr2P16070_001 | Banana | cytosol | 12.5 | 16.67 |
| GSMUA_Achr9P28460_001 | Banana | cytosol | 12.5 | 16.67 |
| GSMUA_Achr7P10320_001 | Banana | cytosol | 12.5 | 16.67 |
| GSMUA_Achr6P05260_001 | Banana | cytosol | 11.93 | 15.91 |
| VIT_00s0199g00140.t01 | Wine grape | cytosol | 39.77 | 12.05 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P17880_001 | EnsemblPlants:GSMUA_Achr3T17880_001 | EnsemblPlantsGene:GSMUA_Achr3G17880_001 | Gene3D:1.20.190.20 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0019904 | InterPro:14-3-3 | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | InterPro:IPR036815 |
| PANTHER:PTHR18860 | PANTHER:PTHR18860:SF26 | PFAM:PF00244 | PRINTS:PR00305 | SMART:SM00101 | SUPFAM:SSF48445 |
| UniParc:UPI000294FDE6 | UniProt:M0SFK4 | MapMan:35.1 | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G17880_001]
Coordinates
chr3:-:19361703..19362965
Molecular Weight (calculated)
20168.0 Da
IEP (calculated)
6.885
GRAVY (calculated)
-0.290
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYMEKVTVV AREGEEHTVE EHNLLSVAYK NVIAACRASC RIVSIEQKEG RGNHDHVSHD LSNIRSHRAR IESELNSIYG TILRLLDAHL IPVAAVDSKV
101: FYLNMNREYY RNLAEFKTGS KYQAVTIEIS IVTARYSPVS SDTRLYQWYR PVAGDPFIGL LTDQYVPLIS DNTIRY
101: FYLNMNREYY RNLAEFKTGS KYQAVTIEIS IVTARYSPVS SDTRLYQWYR PVAGDPFIGL LTDQYVPLIS DNTIRY
001: MASGREEFVY MAKLAEQAER YEEMVEFMEK VSAAVDGDEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESRGNDD HVTAIREYRS KIETELSGIC
101: DGILKLLDSR LIPAAASGDS KVFYLKMKGD YHRYLAEFKT GQERKDAAEH TLAAYKSAQD IANAELAPTH PIRLGLALNF SVFYYEILNS PDRACNLAKQ
201: AFDEAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD DAADEIKEAA APKPTEEQQ
101: DGILKLLDSR LIPAAASGDS KVFYLKMKGD YHRYLAEFKT GQERKDAAEH TLAAYKSAQD IANAELAPTH PIRLGLALNF SVFYYEILNS PDRACNLAKQ
201: AFDEAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD DAADEIKEAA APKPTEEQQ
Arabidopsis Description
GRF214-3-3-like protein GF14 omega [Source:UniProtKB/Swiss-Prot;Acc:Q01525]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.