Factsheet for GSMUA_Achr11P10140_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P25460_001	Banana	mitochondrion	76.27	7.88
VIT_03s0038g04080.t01	Wine grape	plastid	66.1	6.89
KRH48974	Soybean	plastid	64.41	6.76
Zm00001d015037_P002	Maize	mitochondrion, plastid	64.41	6.75
Os02t0121000-01	Rice	plastid	64.41	6.7
AT5G64050.1	Thale cress	mitochondrion	64.41	6.67
EES06189	Sorghum	mitochondrion, plastid	64.41	6.65
KRH66310	Soybean	nucleus	62.71	6.62
CDX84484	Canola	plastid	62.71	6.54
CDY43784	Canola	plastid	62.71	6.54
Bra024262.1-P	Field mustard	plastid	62.71	6.34
Zm00001d053901_P001	Maize	mitochondrion, plastid	61.02	6.16
TraesCS6D01G068300.1	Wheat	mitochondrion, plastid	57.63	6.08
TraesCS6A01G070500.1	Wheat	plastid	57.63	6.08
TraesCS6B01G094500.1	Wheat	mitochondrion, plastid	57.63	6.07
Solyc01g112290.2.1	Tomato	plastid	57.63	5.96
HORVU6Hr1G012710.2	Barley	cytosol, plastid	57.63	5.93
Zm00001d003735_P001	Maize	cytosol	3.39	4.55
Zm00001d012985_P001	Maize	cytosol, extracellular	3.39	3.57
Zm00001d026115_P001	Maize	cytosol	3.39	1.08
Zm00001d053389_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr11P10140_001	EnsemblPlants:GSMUA_Achr11T10140_001	EnsemblPlantsGene:GSMUA_Achr11G10140_001	Gene3D:1.10.10.350	GO:GO:0000049	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR020751	InterPro:aa-tRNA-synth_I_codon-bd	InterPro:aa-tRNA-synth_I_codon-bd_sub2
KEGG:00860+6.1.1.17	KEGG:00970+6.1.1.17	SUPFAM:SSF48163	UniParc:UPI00029587D1	UniProt:M0RQZ4	MapMan:35.2

Description

Glutamyl-tRNA synthetase [Source:GMGC_GENE;Acc:GSMUA_Achr11G10140_001]

Coordinates

chr11:+:7948237..7949709

Molecular Weight (calculated)

6760.7 Da

IEP (calculated)

11.767

GRAVY (calculated)

-0.144

Length

59 amino acids

Sequence
(BLAST)

1: MIVESSVKHR RKGHAGWQKW VKCFGKLLKR KERSLFMPIR VLLTGKLQGP DMGGSILLI

Best Arabidopsis Sequence Match ( AT5G64050.1 )
(BLAST)

001: MASLVYGTPW LRVRSLPELA PAFLRRRQSS LFYCSRRSFA VVACSTPVNN GGSVRVRFAP SPTGNLHVGG ARTALFNYLF ARSKGGKFVL RIEDTDLERS
101: TRESEAAVLQ DLSWLGLDWD EGPGVSGDFG PYRQSERNAL YKQYAEKLLE SGHVYRCFCS SEELVKMKEN AKLKQLPPVY TGKWATASDA EIEQELEKGT
201: PFTYRFRVPK EGSLKINDLI RGEVCWNLDT LGDFVVMRSN GQPVYNFCVT VDDATMAISH VIRAEEHLPN TLRQALIYKA LKFPMPQFAH VSLILAPDRS
301: KLSKRHGATS VGQYREMGYL PQGMVNYLAL LGWGDGTENE FFTLEDLVEK FSIERVNKSG AIFDSTKLRW MNGQHLRALP NEKLTKLVGE RWKSAGILTE
401: SEGSFVNEAV ELLKDGIELV TDSDKVLLNL LSYPLHATLA SPEAKPAVED KLHEVAASLI AAYDSGEIPS ALEEGQGAWQ KWVKAFGKSL KRKGKSLFMP
501: LRVLLTGKLH GPEMGTSIVL IYKAGSPGIV VPQAGFVSME ERFKILREID WEALNKDESV PLESTATVST

Arabidopsis Description

OVA3Glutamate--tRNA ligase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FEA2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.