CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43784	Canola	plastid	97.7	97.7
AT5G64050.1	Thale cress	mitochondrion	92.58	91.93
VIT_03s0038g04080.t01	Wine grape	plastid	77.03	77.03
Zm00001d026115_P001	Maize	cytosol	24.91	76.22
Zm00001d053389_P001	Maize	cytosol	16.25	76.03
KRH66310	Soybean	nucleus	74.38	75.31
Zm00001d015037_P002	Maize	mitochondrion, plastid	74.56	74.96
TraesCS6D01G068300.1	Wheat	mitochondrion, plastid	73.5	74.42
KRH48974	Soybean	plastid	73.85	74.38
TraesCS6B01G094500.1	Wheat	mitochondrion, plastid	73.5	74.29
Os02t0121000-01	Rice	plastid	74.38	74.25
TraesCS6A01G070500.1	Wheat	plastid	73.14	74.06
GSMUA_Achr8P25460_001	Banana	mitochondrion	74.03	73.38
EES06189	Sorghum	mitochondrion, plastid	73.85	73.2
Solyc01g112290.2.1	Tomato	plastid	73.5	72.98
HORVU6Hr1G012710.2	Barley	cytosol, plastid	73.32	72.43
Zm00001d053901_P001	Maize	mitochondrion, plastid	73.67	71.4
GSMUA_Achr11P...	Banana	cytosol	6.54	62.71
Zm00001d003735_P001	Maize	cytosol	4.06	52.27
Zm00001d012985_P001	Maize	cytosol, extracellular	4.42	44.64

Protein Annotations

KEGG:00860+6.1.1.17	KEGG:00970+6.1.1.17	Gene3D:1.10.10.350	MapMan:17.2.7	Gene3D:3.40.50.620	MapMan:7.12.1.1
GO:A0A078D819	EnsemblPlants:CDX84484	ProteinID:CDX84484	ProteinID:CDX84484.1	GO:GO:0000049	GO:GO:0000166
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004812	GO:GO:0004818
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0006424	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0043039	EnsemblPlantsGene:GSBRNA2T00141705001
InterPro:Glu-tRNA-ligase_bac/mito	InterPro:Glu/Gln-tRNA-synth	InterPro:Glu/Gln-tRNA-synth_Ib_cat-dom	InterPro:GluRS_core	InterPro:IPR014729	InterPro:IPR020751
HAMAP:MF_00022	PFAM:PF00749	PRINTS:PR00987	ScanProsite:PS00178	PANTHER:PTHR43311	PANTHER:PTHR43311:SF2
MetaCyc:PWY-5188	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF48163	SUPFAM:SSF52374	TIGRFAMs:TIGR00464	UniParc:UPI0004EEA673
InterPro:aa-tRNA-synth_I_CS	InterPro:aa-tRNA-synth_I_codon-bd	InterPro:aa-tRNA-synth_I_codon-bd_sub2	SEG:seg	:	:

Description

BnaC03g50160D

Coordinates

chrLK031837:-:1405515..1408467

Molecular Weight (calculated)

62725.1 Da

IEP (calculated)

7.018

GRAVY (calculated)

-0.257

Length

566 amino acids

Sequence
(BLAST)

001: MASLVFNTPW LRVRSLPELA PTFLRRRQSS RRSFSVVACS SPGGNGGDPV RVRFAPSPTG NLHVGGARTA LFNYLFARSK GGKFVLRVED TDLERSTRES
101: EAAVLQDLEW LGLDWDEGPG VGGDFGPYRQ SERNALYKQY AEKLLESGQV YRCFCSSEEL VKMKEIAKLK QLPPVYTGKW ATASDAEVEQ ELEKGTPFTY
201: RFRVPKEGSL KINDLIRGEV SWNLDTLGDF VVMRSNGQPV YNFCVTVDDA TMAISHVIRA EEHLPNTLRQ ALIYKALEFP MPQFAHVSLI LAPDRSKLSK
301: RHGATSVGQY REMGFLPQGM VNYLALLGWG DGTENEFFTL EQLVEKFSIE RVNKSGAIFD STKLRWMNGL HLKALPSEKL TKLVGEQWKS AGILTESEGS
401: FVDEAVELLK DGIDVVTDSD NVLLNLLSYP LHATLASPEA KPAVEDKLRE VAASLVAAYD SGEIPRALAE GQSGWQKWVK AFGKSTKRKG KSLFMPLRVL
501: LTGKLHGPEM ATSIVLIHKA GSPGIVAPQA EFVSMEERFK ILREMDWEAL NKGESVPLES TAAAST

Best Arabidopsis Sequence Match ( AT5G64050.1 )
(BLAST)

001: MASLVYGTPW LRVRSLPELA PAFLRRRQSS LFYCSRRSFA VVACSTPVNN GGSVRVRFAP SPTGNLHVGG ARTALFNYLF ARSKGGKFVL RIEDTDLERS
101: TRESEAAVLQ DLSWLGLDWD EGPGVSGDFG PYRQSERNAL YKQYAEKLLE SGHVYRCFCS SEELVKMKEN AKLKQLPPVY TGKWATASDA EIEQELEKGT
201: PFTYRFRVPK EGSLKINDLI RGEVCWNLDT LGDFVVMRSN GQPVYNFCVT VDDATMAISH VIRAEEHLPN TLRQALIYKA LKFPMPQFAH VSLILAPDRS
301: KLSKRHGATS VGQYREMGYL PQGMVNYLAL LGWGDGTENE FFTLEDLVEK FSIERVNKSG AIFDSTKLRW MNGQHLRALP NEKLTKLVGE RWKSAGILTE
401: SEGSFVNEAV ELLKDGIELV TDSDKVLLNL LSYPLHATLA SPEAKPAVED KLHEVAASLI AAYDSGEIPS ALEEGQGAWQ KWVKAFGKSL KRKGKSLFMP
501: LRVLLTGKLH GPEMGTSIVL IYKAGSPGIV VPQAGFVSME ERFKILREID WEALNKDESV PLESTATVST

Arabidopsis Description

OVA3Glutamate--tRNA ligase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FEA2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.