Factsheet for GSMUA_Achr8P25460_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g04080.t01	Wine grape	plastid	77.06	77.74
Zm00001d015037_P002	Maize	mitochondrion, plastid	76.01	77.09
Os02t0121000-01	Rice	plastid	76.18	76.72
EES06189	Sorghum	mitochondrion, plastid	76.53	76.53
GSMUA_Achr11P...	Banana	cytosol	7.88	76.27
Zm00001d026115_P001	Maize	cytosol	24.34	75.14
AT5G64050.1	Thale cress	mitochondrion	74.78	74.91
Zm00001d053901_P001	Maize	mitochondrion, plastid	76.01	74.32
KRH66310	Soybean	nucleus	72.5	74.06
CDX84484	Canola	plastid	73.38	74.03
CDY43784	Canola	plastid	73.38	74.03
TraesCS6A01G070500.1	Wheat	plastid	72.33	73.88
TraesCS6D01G068300.1	Wheat	mitochondrion, plastid	72.33	73.88
TraesCS6B01G094500.1	Wheat	mitochondrion, plastid	72.33	73.75
KRH48974	Soybean	plastid	72.5	73.67
Solyc01g112290.2.1	Tomato	plastid	72.5	72.63
HORVU6Hr1G012710.2	Barley	cytosol, plastid	71.63	71.38
Zm00001d053389_P001	Maize	cytosol	15.06	71.07
Bra024262.1-P	Field mustard	plastid	71.63	70.03
Zm00001d003735_P001	Maize	cytosol	4.73	61.36
Zm00001d012985_P001	Maize	cytosol, extracellular	5.08	51.79

Protein Annotations

KEGG:00860+6.1.1.17	KEGG:00970+6.1.1.17	Gene3D:1.10.10.350	MapMan:17.2.7	Gene3D:3.40.50.620	MapMan:7.12.1.1
GO:GO:0000049	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0004812	GO:GO:0004818	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0006424
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0016874
GO:GO:0019538	GO:GO:0043039	EnsemblPlantsGene:GSMUA_Achr8G25460_001	EnsemblPlants:GSMUA_Achr8P25460_001	EnsemblPlants:GSMUA_Achr8T25460_001	InterPro:Glu-tRNA-ligase_bac/mito
InterPro:Glu/Gln-tRNA-synth	InterPro:Glu/Gln-tRNA-synth_Ib_cat-dom	InterPro:GluRS_core	InterPro:IPR014729	InterPro:IPR020751	UniProt:M0TTJ9
HAMAP:MF_00022	PFAM:PF00749	PRINTS:PR00987	ScanProsite:PS00178	PANTHER:PTHR43311	PANTHER:PTHR43311:SF2
InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF48163	SUPFAM:SSF52374	TIGRFAMs:TIGR00464	UniParc:UPI00029650E0	InterPro:aa-tRNA-synth_I_CS
InterPro:aa-tRNA-synth_I_codon-bd	InterPro:aa-tRNA-synth_I_codon-bd_sub2	SEG:seg	:	:	:

Description

Glutamyl-tRNA synthetase [Source:GMGC_GENE;Acc:GSMUA_Achr8G25460_001]

Coordinates

chr8:-:29333007..29345170

Molecular Weight (calculated)

64023.9 Da

IEP (calculated)

8.171

GRAVY (calculated)

-0.302

Length

571 amino acids

Sequence
(BLAST)

001: MARLVGSPWA RIRVLPELPA PLFRRGFAAK PYISVRRRNL SVSASYANAG PTEGEVRVRF APSPTGNLHV GGARTALFNY LFARSQGGKF ILRIEDTDLE
101: RSTRKSEEAM LNDLSWLGLN WDEGPSVGGD YGPYRQSERN SLYKEYAEKL LESGAVYRCF CSNEELEQMK ERAKQMQLPP MYTGKWRTAS DEEIKQELAK
201: GTSYTYRFRV PKEGNLKITD LIRGEVSWSL DTLGDFVIMR SNGQPVYNFC VTVDDATMRI SHVIRAEEHL PNTLRQALIY KALGFSMPSF AHVSLILAPD
301: RSKLSKRHGA TSVGQFREMG YLPQAMVNYL ALLGWGDGTE NEFFTIDQLV EKFSISRVNK SGAIFDSTKL RWMNGQHLRS LPPEELLKIF GDRWKCTGVL
401: LESEGIFIKD STELLKDGVD LITEVDTALS NLLSYPLYTT LSSEECKPIV QDKLSEVAAS LIAAYDGGEL PAALEEGHAG WQKWVKGFGK LLKRKGKSLF
501: MPLRVLLTGK LHGPDMGGSI LLIYKAGLWG VVNPEAGFIT LAERFKMLRE VDWEALDKEN KQLESVAGQS D

Best Arabidopsis Sequence Match ( AT5G64050.1 )
(BLAST)

001: MASLVYGTPW LRVRSLPELA PAFLRRRQSS LFYCSRRSFA VVACSTPVNN GGSVRVRFAP SPTGNLHVGG ARTALFNYLF ARSKGGKFVL RIEDTDLERS
101: TRESEAAVLQ DLSWLGLDWD EGPGVSGDFG PYRQSERNAL YKQYAEKLLE SGHVYRCFCS SEELVKMKEN AKLKQLPPVY TGKWATASDA EIEQELEKGT
201: PFTYRFRVPK EGSLKINDLI RGEVCWNLDT LGDFVVMRSN GQPVYNFCVT VDDATMAISH VIRAEEHLPN TLRQALIYKA LKFPMPQFAH VSLILAPDRS
301: KLSKRHGATS VGQYREMGYL PQGMVNYLAL LGWGDGTENE FFTLEDLVEK FSIERVNKSG AIFDSTKLRW MNGQHLRALP NEKLTKLVGE RWKSAGILTE
401: SEGSFVNEAV ELLKDGIELV TDSDKVLLNL LSYPLHATLA SPEAKPAVED KLHEVAASLI AAYDSGEIPS ALEEGQGAWQ KWVKAFGKSL KRKGKSLFMP
501: LRVLLTGKLH GPEMGTSIVL IYKAGSPGIV VPQAGFVSME ERFKILREID WEALNKDESV PLESTATVST

Arabidopsis Description

OVA3Glutamate--tRNA ligase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FEA2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.