Factsheet for HORVU6Hr1G012710.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G070500.1	Wheat	plastid	95.11	97.5
TraesCS6B01G094500.1	Wheat	mitochondrion, plastid	94.76	96.96
TraesCS6D01G068300.1	Wheat	mitochondrion, plastid	94.07	96.42
Os02t0121000-01	Rice	plastid	82.2	83.07
EES06189	Sorghum	mitochondrion, plastid	79.76	80.03
Zm00001d015037_P002	Maize	mitochondrion, plastid	78.19	79.57
Zm00001d053901_P001	Maize	mitochondrion, plastid	79.76	78.25
CDX84484	Canola	plastid	72.43	73.32
VIT_03s0038g04080.t01	Wine grape	plastid	71.9	72.79
CDY43784	Canola	plastid	71.38	72.26
AT5G64050.1	Thale cress	mitochondrion	71.55	71.93
GSMUA_Achr8P25460_001	Banana	mitochondrion	71.38	71.63
KRH66310	Soybean	nucleus	69.28	71.02
KRH48974	Soybean	plastid	69.28	70.64
Solyc01g112290.2.1	Tomato	plastid	69.11	69.47
Bra024262.1-P	Field mustard	plastid	69.63	68.32
HORVU4Hr1G041070.1	Barley	plastid	10.65	59.22
GSMUA_Achr11P...	Banana	cytosol	5.93	57.63
HORVU5Hr1G012640.1	Barley	plastid	10.12	53.21

Protein Annotations

KEGG:00860+6.1.1.17	KEGG:00970+6.1.1.17	Gene3D:1.10.10.350	MapMan:17.2.7	Gene3D:3.40.50.620	MapMan:7.12.1.1
UniProt:A0A287TCG9	GO:GO:0000049	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0004812	GO:GO:0004818	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418
GO:GO:0006424	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009536
GO:GO:0009987	GO:GO:0016874	GO:GO:0019538	GO:GO:0043039	InterPro:Glu-tRNA-ligase_bac/mito	InterPro:Glu/Gln-tRNA-synth
InterPro:Glu/Gln-tRNA-synth_Ib_cat-dom	InterPro:GluRS_core	EnsemblPlantsGene:HORVU6Hr1G012710	EnsemblPlants:HORVU6Hr1G012710.2	InterPro:IPR014729	InterPro:IPR020751
HAMAP:MF_00022	PFAM:PF00749	PRINTS:PR00987	ScanProsite:PS00178	PANTHER:PTHR43311	PANTHER:PTHR43311:SF2
InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF48163	SUPFAM:SSF52374	TIGRFAMs:TIGR00464	UniParc:UPI000B481BC2	InterPro:aa-tRNA-synth_I_CS
InterPro:aa-tRNA-synth_I_codon-bd	InterPro:aa-tRNA-synth_I_codon-bd_sub2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:25052387..25056598

Molecular Weight (calculated)

63216.3 Da

IEP (calculated)

6.527

GRAVY (calculated)

-0.347

Length

573 amino acids

Sequence
(BLAST)

001: SQSNPPPGEE GDEMAASNFM GSSARLRVGL LPSVTPRLSR RALATRASAD SGGSGPVRVR FAPSPTGNLH VGGARTALFN YLFARSRGGK FVLRVEDTDL
101: ERSTKKSEEA VLTDLSWLGL DWDEGPDIGG DFGPYRQSER NALYKEHAQK LMESGAVYRC FCSNEELEKM KETANRMKIP PVYMGKWATA SDAEVQQELE
201: KGTPYTYRFR VPKEGSLKIN DLIRGEVSWN LNTLGDFVIM RSNGQPVYNF CVTVDDATMR ISHVIRAEEH LPNTLRQALI YKALGFAMPL FAHVSLILAP
301: DKSKLSKRHG ATSVGQYKEM GYLPQAMVNY LALLGWGDGT ENEFFIIDDL VEKFTIDRVN KSGAVFDATK LKWMNGQHLR SLPSDLLIKD FEDQWRSTGI
401: LLESESGFAK EAAELLKEGI DLITDADAAL CKLLSYPLHE TLSSDEAKSV VEDKLSEIAS GLISAYDSGE LDQALAEGHD GWKKWVKSFG KTHKRKGKSL
501: FMPLRVLLTG KLHGPAMDST VILVHKAGTS GAVAPQSGFV SLDERFKILK EVNWESLQKQ QESPVESAVP AAS

Best Arabidopsis Sequence Match ( AT5G64050.1 )
(BLAST)

001: MASLVYGTPW LRVRSLPELA PAFLRRRQSS LFYCSRRSFA VVACSTPVNN GGSVRVRFAP SPTGNLHVGG ARTALFNYLF ARSKGGKFVL RIEDTDLERS
101: TRESEAAVLQ DLSWLGLDWD EGPGVSGDFG PYRQSERNAL YKQYAEKLLE SGHVYRCFCS SEELVKMKEN AKLKQLPPVY TGKWATASDA EIEQELEKGT
201: PFTYRFRVPK EGSLKINDLI RGEVCWNLDT LGDFVVMRSN GQPVYNFCVT VDDATMAISH VIRAEEHLPN TLRQALIYKA LKFPMPQFAH VSLILAPDRS
301: KLSKRHGATS VGQYREMGYL PQGMVNYLAL LGWGDGTENE FFTLEDLVEK FSIERVNKSG AIFDSTKLRW MNGQHLRALP NEKLTKLVGE RWKSAGILTE
401: SEGSFVNEAV ELLKDGIELV TDSDKVLLNL LSYPLHATLA SPEAKPAVED KLHEVAASLI AAYDSGEIPS ALEEGQGAWQ KWVKAFGKSL KRKGKSLFMP
501: LRVLLTGKLH GPEMGTSIVL IYKAGSPGIV VPQAGFVSME ERFKILREID WEALNKDESV PLESTATVST

Arabidopsis Description

OVA3Glutamate--tRNA ligase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FEA2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.