Factsheet for Zm00001d015037_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06189	Sorghum	mitochondrion, plastid	93.07	91.77
Zm00001d053901_P001	Maize	mitochondrion, plastid	93.43	90.07
Os02t0121000-01	Rice	plastid	86.32	85.71
Zm00001d026115_P001	Maize	cytosol	26.64	81.08
TraesCS6A01G070500.1	Wheat	plastid	80.28	80.86
TraesCS6B01G094500.1	Wheat	mitochondrion, plastid	80.28	80.71
TraesCS6D01G068300.1	Wheat	mitochondrion, plastid	80.11	80.68
HORVU6Hr1G012710.2	Barley	cytosol, plastid	79.57	78.19
Zm00001d053389_P001	Maize	cytosol	16.7	77.69
GSMUA_Achr8P25460_001	Banana	mitochondrion	77.09	76.01
CDX84484	Canola	plastid	74.96	74.56
VIT_03s0038g04080.t01	Wine grape	plastid	74.78	74.38
CDY43784	Canola	plastid	74.25	73.85
KRH66310	Soybean	nucleus	72.82	73.35
AT5G64050.1	Thale cress	mitochondrion	74.25	73.33
KRH48974	Soybean	plastid	71.58	71.71
Bra024262.1-P	Field mustard	plastid	72.47	69.86
Solyc01g112290.2.1	Tomato	plastid	70.69	69.82
GSMUA_Achr11P...	Banana	cytosol	6.75	64.41
Zm00001d003735_P001	Maize	cytosol	4.8	61.36
Zm00001d012985_P001	Maize	cytosol, extracellular	5.15	51.79

Protein Annotations

KEGG:00860+6.1.1.17	KEGG:00970+6.1.1.17	Gene3D:1.10.10.350	EntrezGene:100383787	MapMan:17.2.7	Gene3D:3.40.50.620
MapMan:7.12.1.1	ProteinID:AQK67935.1	EMBL:BT061274	UniProt:C0HG18	GO:GO:0000049	GO:GO:0000166
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004812	GO:GO:0004818
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0006424	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0016874	GO:GO:0019538	GO:GO:0043039
InterPro:Glu-tRNA-ligase_bac/mito	InterPro:Glu/Gln-tRNA-synth	InterPro:Glu/Gln-tRNA-synth_Ib_cat-dom	InterPro:GluRS_core	InterPro:IPR014729	InterPro:IPR020751
HAMAP:MF_00022	PFAM:PF00749	PRINTS:PR00987	ScanProsite:PS00178	PANTHER:PTHR43311	PANTHER:PTHR43311:SF2
InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF48163	SUPFAM:SSF52374	TIGRFAMs:TIGR00464	UniParc:UPI0001948549	EnsemblPlantsGene:Zm00001d015037
EnsemblPlants:Zm00001d015037_P002	EnsemblPlants:Zm00001d015037_T002	InterPro:aa-tRNA-synth_I_CS	InterPro:aa-tRNA-synth_I_codon-bd	InterPro:aa-tRNA-synth_I_codon-bd_sub2	SEG:seg

Description

Glutamate--tRNA ligase chloroplastic/mitochondrial

Coordinates

chr5:-:72934800..72939876

Molecular Weight (calculated)

62472.5 Da

IEP (calculated)

7.145

GRAVY (calculated)

-0.307

Length

563 amino acids

Sequence
(BLAST)

001: MAASALLTGS PWLRMRLLPD APARPFRHLH LRRSFSVRAS GADGSPAPVR VRFAPSPTGN LHVGGARTAL FNYLFARSKG GRFVLRVEDT DLERSTRKSE
101: EAVLADLAWL GLDWDEGPDV GGDFGPYRQS ERNSLYKQYA EKLLDSGAVY RCFCSSEELE QMKEVAKQRQ LPPVYMGKWA SASDAEVQQE LEKGTPYTYR
201: FRVPKEGSLK ISDLIRGEVS WNLDTLGDFV IMRSNGQPVY NFCVTVDDAT MQISHVIRAE EHLPNTLRQA LIYKALGFAM PSFAHVSLIL APDRSKLSKR
301: HGATSVGQYK NMGYLPQAMV NYLALLGWGD GTENEFFTID DLVQKFTINR VNKSGAVFDA TKLKWMNGQH LRSFPHDELI KAFEDRWTDT GILQESESGF
401: AKEAAELLKD GIDLITDADA ALTNLLSYPL HTTLSSEEAK PVVQDKISEV AWSLISAYDS GELGQALAEG RDGWQKWVKG FGKSIKRKGK GLFMPLRVLL
501: TGKLHGPDMG GSIALIHKAG VCCAVTPQSN FVTLDERFRM LKDVDWESLA KEQETPAVPA AAS

Best Arabidopsis Sequence Match ( AT5G64050.1 )
(BLAST)

001: MASLVYGTPW LRVRSLPELA PAFLRRRQSS LFYCSRRSFA VVACSTPVNN GGSVRVRFAP SPTGNLHVGG ARTALFNYLF ARSKGGKFVL RIEDTDLERS
101: TRESEAAVLQ DLSWLGLDWD EGPGVSGDFG PYRQSERNAL YKQYAEKLLE SGHVYRCFCS SEELVKMKEN AKLKQLPPVY TGKWATASDA EIEQELEKGT
201: PFTYRFRVPK EGSLKINDLI RGEVCWNLDT LGDFVVMRSN GQPVYNFCVT VDDATMAISH VIRAEEHLPN TLRQALIYKA LKFPMPQFAH VSLILAPDRS
301: KLSKRHGATS VGQYREMGYL PQGMVNYLAL LGWGDGTENE FFTLEDLVEK FSIERVNKSG AIFDSTKLRW MNGQHLRALP NEKLTKLVGE RWKSAGILTE
401: SEGSFVNEAV ELLKDGIELV TDSDKVLLNL LSYPLHATLA SPEAKPAVED KLHEVAASLI AAYDSGEIPS ALEEGQGAWQ KWVKAFGKSL KRKGKSLFMP
501: LRVLLTGKLH GPEMGTSIVL IYKAGSPGIV VPQAGFVSME ERFKILREID WEALNKDESV PLESTATVST

Arabidopsis Description

OVA3Glutamate--tRNA ligase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FEA2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.