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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 8
  • cytosol 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:cytosol
iPSORT:plastid
MultiLoc:mitochondrion
Plant-mPloc:cytosol, mitochondrion, plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH48974 Soybean plastid 94.63 94.13
VIT_03s0038g04080.t01 Wine grape plastid 80.5 79.51
AT5G64050.1 Thale cress mitochondrion 76.21 74.74
Zm00001d026115_P001 Maize cytosol 24.69 74.59
CDX84484 Canola plastid 75.31 74.38
Zm00001d053389_P001 Maize cytosol 16.1 74.38
CDY43784 Canola plastid 75.13 74.2
Solyc01g112290.2.1 Tomato plastid 75.13 73.68
Zm00001d015037_P002 Maize mitochondrion, plastid 73.35 72.82
GSMUA_Achr8P25460_001 Banana mitochondrion 74.06 72.5
Os02t0121000-01 Rice plastid 73.17 72.13
TraesCS6B01G094500.1 Wheat mitochondrion, plastid 71.74 71.61
EES06189 Sorghum mitochondrion, plastid 72.99 71.45
TraesCS6A01G070500.1 Wheat plastid 71.2 71.2
TraesCS6D01G068300.1 Wheat mitochondrion, plastid 70.84 70.84
Bra024262.1-P Field mustard plastid 73.35 70.21
Zm00001d053901_P001 Maize mitochondrion, plastid 72.45 69.35
HORVU6Hr1G012710.2 Barley cytosol, plastid 71.02 69.28
GSMUA_Achr11P... Banana cytosol 6.62 62.71
Zm00001d003735_P001 Maize cytosol 4.11 52.27
Zm00001d012985_P001 Maize cytosol, extracellular 4.47 44.64
Protein Annotations
KEGG:00860+6.1.1.17KEGG:00970+6.1.1.17Gene3D:1.10.10.350EntrezGene:100810730MapMan:17.2.7Gene3D:3.40.50.620
MapMan:7.12.1.1EMBL:ACUP02001938EnsemblPlantsGene:GLYMA_03G097900GO:GO:0000049GO:GO:0000166GO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0003824GO:GO:0004812GO:GO:0004818GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006139
GO:GO:0006412GO:GO:0006418GO:GO:0006424GO:GO:0008150GO:GO:0008152GO:GO:0008270
GO:GO:0009058GO:GO:0009987GO:GO:0016874GO:GO:0019538GO:GO:0043039InterPro:Glu-tRNA-ligase_bac/mito
InterPro:Glu/Gln-tRNA-synthInterPro:Glu/Gln-tRNA-synth_Ib_cat-domInterPro:GluRS_coreUniProt:I1JME7InterPro:IPR014729InterPro:IPR020751
EnsemblPlants:KRH66310ProteinID:KRH66310ProteinID:KRH66310.1HAMAP:MF_00022PFAM:PF00749PRINTS:PR00987
ScanProsite:PS00178PANTHER:PTHR43311PANTHER:PTHR43311:SF2MetaCyc:PWY-5188InterPro:Rossmann-like_a/b/a_foldSUPFAM:SSF48163
SUPFAM:SSF52374TIGRFAMs:TIGR00464UniParc:UPI0002336E89InterPro:aa-tRNA-synth_I_CSInterPro:aa-tRNA-synth_I_codon-bdInterPro:aa-tRNA-synth_I_codon-bd_sub2
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr3:-:28558709..28567847
Molecular Weight (calculated)
62688.9 Da
IEP (calculated)
6.803
GRAVY (calculated)
-0.315
Length
559 amino acids
Sequence
(BLAST)
001: MALLCGGMPW SKVIVPPIFH HSHTPRTFFF QRRRFSVSAL SEQPPPVRVR FAPSPTGNLH VGGARTALFN YLFARSKGGK FVLRIEDTDL ERSSRESEEA
101: MLKDLSWLGL DWDEGPGVGG DYGPYRQSER NSLYKQYAEN LHQSGHVYRC FCSNEELEKM KEVAKLKQLP PVYTGKWASA TNEEVEEELE KGTPYTYRFR
201: VPKGSLKIND QIRGEVSWNL DTLGDFVIMR SNGQPVYNFC VTVDDATMAI SHVIRAEEHL PNTLRQALIY KALGFPMPYF AHVSLILAPD RSKLSKRHGA
301: TSVGQFREMG YLPEAMVNYL ALLGWGDGTE NEFFTLDQLV EKFTIERVNK SGAIFDSTKL RWMNGQHLRA RPSEELTKLI AEYWKTSGLL TVSDGPFIDE
401: AVHLLKDGID LINDADKALA NLLSYPVHST LQSDEAESVL LDNLSEFAAS LLAAYDSGDL VAALEEGHTG WQKWVKGFGK SLKRKGKSLF MPLRLLLTGK
501: LHGPDMGASV ALLYRAGTSN VVAPESGFVT LDERFKMLRQ IDWEALSKDQ PVKETAAPV
Best Arabidopsis Sequence Match ( AT5G64050.1 )
(BLAST)
001: MASLVYGTPW LRVRSLPELA PAFLRRRQSS LFYCSRRSFA VVACSTPVNN GGSVRVRFAP SPTGNLHVGG ARTALFNYLF ARSKGGKFVL RIEDTDLERS
101: TRESEAAVLQ DLSWLGLDWD EGPGVSGDFG PYRQSERNAL YKQYAEKLLE SGHVYRCFCS SEELVKMKEN AKLKQLPPVY TGKWATASDA EIEQELEKGT
201: PFTYRFRVPK EGSLKINDLI RGEVCWNLDT LGDFVVMRSN GQPVYNFCVT VDDATMAISH VIRAEEHLPN TLRQALIYKA LKFPMPQFAH VSLILAPDRS
301: KLSKRHGATS VGQYREMGYL PQGMVNYLAL LGWGDGTENE FFTLEDLVEK FSIERVNKSG AIFDSTKLRW MNGQHLRALP NEKLTKLVGE RWKSAGILTE
401: SEGSFVNEAV ELLKDGIELV TDSDKVLLNL LSYPLHATLA SPEAKPAVED KLHEVAASLI AAYDSGEIPS ALEEGQGAWQ KWVKAFGKSL KRKGKSLFMP
501: LRVLLTGKLH GPEMGTSIVL IYKAGSPGIV VPQAGFVSME ERFKILREID WEALNKDESV PLESTATVST
Arabidopsis Description
OVA3Glutamate--tRNA ligase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FEA2]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.