CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66310	Soybean	nucleus	94.13	94.63
VIT_03s0038g04080.t01	Wine grape	plastid	78.11	77.56
Solyc01g112290.2.1	Tomato	plastid	75.8	74.74
AT5G64050.1	Thale cress	mitochondrion	75.27	74.21
CDX84484	Canola	plastid	74.38	73.85
CDY43784	Canola	plastid	74.2	73.67
Zm00001d053389_P001	Maize	cytosol	15.84	73.55
Zm00001d026115_P001	Maize	cytosol	24.02	72.97
GSMUA_Achr8P25460_001	Banana	mitochondrion	73.67	72.5
Os02t0121000-01	Rice	plastid	72.42	71.78
Zm00001d015037_P002	Maize	mitochondrion, plastid	71.71	71.58
TraesCS6B01G094500.1	Wheat	mitochondrion, plastid	71.0	71.25
TraesCS6A01G070500.1	Wheat	plastid	70.46	70.84
EES06189	Sorghum	mitochondrion, plastid	71.71	70.58
TraesCS6D01G068300.1	Wheat	mitochondrion, plastid	70.11	70.48
Bra024262.1-P	Field mustard	plastid	72.42	69.69
HORVU6Hr1G012710.2	Barley	cytosol, plastid	70.64	69.28
Zm00001d053901_P001	Maize	mitochondrion, plastid	71.17	68.49
GSMUA_Achr11P...	Banana	cytosol	6.76	64.41
Zm00001d003735_P001	Maize	cytosol	3.74	47.73
Zm00001d012985_P001	Maize	cytosol, extracellular	4.09	41.07

Protein Annotations

KEGG:00860+6.1.1.17	KEGG:00970+6.1.1.17	Gene3D:1.10.10.350	EntrezGene:100787983	MapMan:17.2.7	Gene3D:3.40.50.620
MapMan:7.12.1.1	EMBL:ACUP02004320	EnsemblPlantsGene:GLYMA_07G124000	GO:GO:0000049	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004812	GO:GO:0004818	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006412	GO:GO:0006418	GO:GO:0006424	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0009058	GO:GO:0009987	GO:GO:0016874	GO:GO:0019538	GO:GO:0043039	InterPro:Glu-tRNA-ligase_bac/mito
InterPro:Glu/Gln-tRNA-synth	InterPro:Glu/Gln-tRNA-synth_Ib_cat-dom	InterPro:GluRS_core	InterPro:IPR014729	InterPro:IPR020751	UniProt:K7L0Z1
EnsemblPlants:KRH48974	ProteinID:KRH48974	ProteinID:KRH48974.1	HAMAP:MF_00022	PFAM:PF00749	PRINTS:PR00987
ScanProsite:PS00178	PANTHER:PTHR43311	PANTHER:PTHR43311:SF2	MetaCyc:PWY-5188	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF48163
SUPFAM:SSF52374	TIGRFAMs:TIGR00464	UniParc:UPI00023387DD	InterPro:aa-tRNA-synth_I_CS	InterPro:aa-tRNA-synth_I_codon-bd	InterPro:aa-tRNA-synth_I_codon-bd_sub2
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:14684345..14702319

Molecular Weight (calculated)

62814.8 Da

IEP (calculated)

6.584

GRAVY (calculated)

-0.323

Length

562 amino acids

Sequence
(BLAST)

001: MALLCGGTPW SKVTISPIFH HSHTPRTFFF QRRRFSVSAA FSEQQPPPPV RVRFAPSPTG NLHVGGARTA LFNYLFARSK GGKFVLRIED TDLERSTRES
101: EEAMLKDLSW LGLDWDEGPG VGGDYGPYRQ SDRNSLYKQF ADNLHQSGHV YRCFCSNEEL EKMKEDAKLK QLPPVYTGKW ASATNEEVEE ELAKGTPYTY
201: RFRVPKGSLK INDQIRGEVS WNLDTLGDFV IMRSNGQPVY NFCVTVDDAT MAISHVIRAE EHLPNTLRQA LIYKALGFPM PYFAHVSLIL APDRSKLSKR
301: HGATSVGQFR EMGYLPEAMV NYLALLGWGD GTENEFFTLD QLVEKFTIER VNKSGAIFDS TKLRWMNGQH LRARPSEELT KLIGEYWKTS GLLTVSDGSF
401: IDEAVQLLKD GIDLINDADK ALANLLSYPV YSTLQSDEAE SVLQDNLSEF AASLLAAYDS GDLVAALEEG HAGWQKWVKG FGKLLKRKGK SLFMPLRLLL
501: TGKIHGPDMG ASVVLLYKAG TSNAVAPDAG FVTLDERFKI LGQINWETLS KDQTVKETAD PV

Best Arabidopsis Sequence Match ( AT5G64050.1 )
(BLAST)

001: MASLVYGTPW LRVRSLPELA PAFLRRRQSS LFYCSRRSFA VVACSTPVNN GGSVRVRFAP SPTGNLHVGG ARTALFNYLF ARSKGGKFVL RIEDTDLERS
101: TRESEAAVLQ DLSWLGLDWD EGPGVSGDFG PYRQSERNAL YKQYAEKLLE SGHVYRCFCS SEELVKMKEN AKLKQLPPVY TGKWATASDA EIEQELEKGT
201: PFTYRFRVPK EGSLKINDLI RGEVCWNLDT LGDFVVMRSN GQPVYNFCVT VDDATMAISH VIRAEEHLPN TLRQALIYKA LKFPMPQFAH VSLILAPDRS
301: KLSKRHGATS VGQYREMGYL PQGMVNYLAL LGWGDGTENE FFTLEDLVEK FSIERVNKSG AIFDSTKLRW MNGQHLRALP NEKLTKLVGE RWKSAGILTE
401: SEGSFVNEAV ELLKDGIELV TDSDKVLLNL LSYPLHATLA SPEAKPAVED KLHEVAASLI AAYDSGEIPS ALEEGQGAWQ KWVKAFGKSL KRKGKSLFMP
501: LRVLLTGKLH GPEMGTSIVL IYKAGSPGIV VPQAGFVSME ERFKILREID WEALNKDESV PLESTATVST

Arabidopsis Description

OVA3Glutamate--tRNA ligase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FEA2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.