CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84484	Canola	plastid	97.7	97.7
Bra024262.1-P	Field mustard	plastid	98.23	95.21
AT5G64050.1	Thale cress	mitochondrion	92.58	91.93
VIT_03s0038g04080.t01	Wine grape	plastid	76.86	76.86
Zm00001d026115_P001	Maize	cytosol	24.91	76.22
Zm00001d053389_P001	Maize	cytosol	16.25	76.03
KRH66310	Soybean	nucleus	74.2	75.13
Zm00001d015037_P002	Maize	mitochondrion, plastid	73.85	74.25
KRH48974	Soybean	plastid	73.67	74.2
Os02t0121000-01	Rice	plastid	74.2	74.07
TraesCS6D01G068300.1	Wheat	mitochondrion, plastid	72.61	73.52
TraesCS6B01G094500.1	Wheat	mitochondrion, plastid	72.61	73.39
GSMUA_Achr8P25460_001	Banana	mitochondrion	74.03	73.38
TraesCS6A01G070500.1	Wheat	plastid	72.26	73.17
Solyc01g112290.2.1	Tomato	plastid	73.5	72.98
EES06189	Sorghum	mitochondrion, plastid	72.97	72.33
HORVU6Hr1G012710.2	Barley	cytosol, plastid	72.26	71.38
Zm00001d053901_P001	Maize	mitochondrion, plastid	72.79	70.55
GSMUA_Achr11P...	Banana	cytosol	6.54	62.71
Zm00001d003735_P001	Maize	cytosol	4.06	52.27
Zm00001d012985_P001	Maize	cytosol, extracellular	4.42	44.64

Protein Annotations

KEGG:00860+6.1.1.17	KEGG:00970+6.1.1.17	Gene3D:1.10.10.350	MapMan:17.2.7	Gene3D:3.40.50.620	MapMan:7.12.1.1
GO:A0A078I2F0	UniProt:A0A078I2F0	EnsemblPlants:CDY43784	ProteinID:CDY43784	ProteinID:CDY43784.1	GO:GO:0000049
GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004812
GO:GO:0004818	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0006424	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0016874	GO:GO:0019538
GO:GO:0043039	EnsemblPlantsGene:GSBRNA2T00077285001	InterPro:Glu-tRNA-ligase_bac/mito	InterPro:Glu/Gln-tRNA-synth	InterPro:Glu/Gln-tRNA-synth_Ib_cat-dom	InterPro:GluRS_core
InterPro:IPR014729	InterPro:IPR020751	HAMAP:MF_00022	PFAM:PF00749	PRINTS:PR00987	ScanProsite:PS00178
PANTHER:PTHR43311	PANTHER:PTHR43311:SF2	MetaCyc:PWY-5188	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF48163	SUPFAM:SSF52374
TIGRFAMs:TIGR00464	UniParc:UPI0004EE098C	InterPro:aa-tRNA-synth_I_CS	InterPro:aa-tRNA-synth_I_codon-bd	InterPro:aa-tRNA-synth_I_codon-bd_sub2	SEG:seg

Description

BnaA06g23200DBnaA06g23200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I2F0]

Coordinates

chrLK032568:-:118669..121644

Molecular Weight (calculated)

62645.1 Da

IEP (calculated)

7.268

GRAVY (calculated)

-0.240

Length

566 amino acids

Sequence
(BLAST)

001: MTSLVFNTPW LRVRSLPELA PTFLRRRQST RRCFSVVACS SPGSNGGDSV RVRFAPSPTG NLHVGGARTA LFNYLFARSK GGKLVLRIED TDLERSTRES
101: EAAVLQDLQW LGLDWDEGPG VGGDFGPYRQ SERNALYKQY AEKLLESGQV YRCFCSSEEL VKMKEIAKLK QLPPVYTGKW ATASDAEVEQ ELEKGTPFTY
201: RFRVPKEGSL KINDLIRGEV SWNLDTLGDF VVMRSNGQPV YNFCVTVDDA TMAISHVIRA EEHLPNTLRQ ALIYKALEFP MPQFAHVSLI LAPDRSKLSK
301: RHGATSVGQY REMGFLPQGM VNYLALLGWG DGTENEFFTL EQLVEKFSIE RVNKSGAIFD STKLRWMNGL HLKALPSEKL TKLVGEQWKS AGILTESEGS
401: FVDEAVELLK DGIDVVTDSD NVLLNLLSYP LHATLASPEA KPAVEDKLHE VAASLVAAYD SGEIPKALAE GQSGWQKWVK AFGKSTKRKG KSLFMPLRVL
501: LTGKLHGPEM ATSIVLISKA GSPGIVAPQA GFVSMEERFK ILREMDWEAL NKSESVPLES TAAAST

Best Arabidopsis Sequence Match ( AT5G64050.1 )
(BLAST)

001: MASLVYGTPW LRVRSLPELA PAFLRRRQSS LFYCSRRSFA VVACSTPVNN GGSVRVRFAP SPTGNLHVGG ARTALFNYLF ARSKGGKFVL RIEDTDLERS
101: TRESEAAVLQ DLSWLGLDWD EGPGVSGDFG PYRQSERNAL YKQYAEKLLE SGHVYRCFCS SEELVKMKEN AKLKQLPPVY TGKWATASDA EIEQELEKGT
201: PFTYRFRVPK EGSLKINDLI RGEVCWNLDT LGDFVVMRSN GQPVYNFCVT VDDATMAISH VIRAEEHLPN TLRQALIYKA LKFPMPQFAH VSLILAPDRS
301: KLSKRHGATS VGQYREMGYL PQGMVNYLAL LGWGDGTENE FFTLEDLVEK FSIERVNKSG AIFDSTKLRW MNGQHLRALP NEKLTKLVGE RWKSAGILTE
401: SEGSFVNEAV ELLKDGIELV TDSDKVLLNL LSYPLHATLA SPEAKPAVED KLHEVAASLI AAYDSGEIPS ALEEGQGAWQ KWVKAFGKSL KRKGKSLFMP
501: LRVLLTGKLH GPEMGTSIVL IYKAGSPGIV VPQAGFVSME ERFKILREID WEALNKDESV PLESTATVST

Arabidopsis Description

OVA3Glutamate--tRNA ligase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FEA2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.