Factsheet for TraesCS6D01G068300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G070500.1	Wheat	plastid	97.85	97.85
TraesCS6B01G094500.1	Wheat	mitochondrion, plastid	97.85	97.68
HORVU6Hr1G012710.2	Barley	cytosol, plastid	96.42	94.07
Os02t0121000-01	Rice	plastid	84.62	83.42
EES06189	Sorghum	mitochondrion, plastid	81.93	80.21
Zm00001d015037_P002	Maize	mitochondrion, plastid	80.68	80.11
Zm00001d053901_P001	Maize	mitochondrion, plastid	81.75	78.25
CDX84484	Canola	plastid	74.42	73.5
VIT_03s0038g04080.t01	Wine grape	plastid	73.7	72.79
CDY43784	Canola	plastid	73.52	72.61
AT5G64050.1	Thale cress	mitochondrion	73.88	72.46
GSMUA_Achr8P25460_001	Banana	mitochondrion	73.88	72.33
KRH66310	Soybean	nucleus	70.84	70.84
KRH48974	Soybean	plastid	70.48	70.11
Solyc01g112290.2.1	Tomato	plastid	70.48	69.12
Bra024262.1-P	Field mustard	plastid	71.74	68.66
GSMUA_Achr11P...	Banana	cytosol	6.08	57.63

Protein Annotations

KEGG:00860+6.1.1.17	KEGG:00970+6.1.1.17	Gene3D:1.10.10.350	MapMan:17.2.7	Gene3D:3.40.50.620	MapMan:7.12.1.1
GO:GO:0000049	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0004812	GO:GO:0004818	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0006424
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
GO:GO:0043039	InterPro:Glu-tRNA-ligase_bac/mito	InterPro:Glu/Gln-tRNA-synth	InterPro:Glu/Gln-tRNA-synth_Ib_cat-dom	InterPro:GluRS_core	InterPro:IPR014729
InterPro:IPR020751	HAMAP:MF_00022	PFAM:PF00749	PRINTS:PR00987	ScanProsite:PS00178	PANTHER:PTHR43311
PANTHER:PTHR43311:SF2	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF48163	SUPFAM:SSF52374	TIGRFAMs:TIGR00464	EnsemblPlantsGene:TraesCS6D01G068300
EnsemblPlants:TraesCS6D01G068300.1	InterPro:aa-tRNA-synth_I_CS	InterPro:aa-tRNA-synth_I_codon-bd	InterPro:aa-tRNA-synth_I_codon-bd_sub2	TIGR:cd00808	SEG:seg

Description

No Description!

Coordinates

chr6D:+:34338461..34342277

Molecular Weight (calculated)

61483.6 Da

IEP (calculated)

8.021

GRAVY (calculated)

-0.268

Length

559 amino acids

Sequence
(BLAST)

001: MAASSFMGSS SRLRVGLLPS VTPRLGRRAL AARASADGGG GPVRVRFAPS PTGNLHVGGA RTALFNYLFA RSRGGKFVLR VEDTDLERST KKSEEAVLSD
101: LSWLGLDWDE GPDIGGDFGP YRQSERNALY KEHAQKLMES GAVYRCFCSS EELEKMKVTA NQMKIPPVYM GKWATASDAE VQQELEKGTP YTYRFRVPKE
201: GSLKINDLIR GEVSWNLNTL GDFVIMRSNG QPVYNFCVTV DDATMRISHV IRAEEHLPNT LRQALIYKAL GFAMPLFAHV SLILAPDKSK LSKRHGATSV
301: GQYKEMGYLP QAMVNYLALL GWGDGTENEF FTIDDLVEKF TINRVNKSGA VFDATKLKWM NGQHLRSLPS DLLIKDFEDR WRSTGILLES ESGFAKEAAE
401: LLKEGIDLIT DADAALCKLL SYPLHDTLSS DEAKSVVEDK LSEVASGLIA AYDSGELGQA LAEGHDGWKK WVKSFGKTHK RKGKSLFMPL RVLLTGKLHG
501: PAMDSTVILV HKAGTSGAVA PHSGFVSIAE RFKILKEVDW ESLQKQQESP VESAVPAAS

Best Arabidopsis Sequence Match ( AT5G64050.1 )
(BLAST)

001: MASLVYGTPW LRVRSLPELA PAFLRRRQSS LFYCSRRSFA VVACSTPVNN GGSVRVRFAP SPTGNLHVGG ARTALFNYLF ARSKGGKFVL RIEDTDLERS
101: TRESEAAVLQ DLSWLGLDWD EGPGVSGDFG PYRQSERNAL YKQYAEKLLE SGHVYRCFCS SEELVKMKEN AKLKQLPPVY TGKWATASDA EIEQELEKGT
201: PFTYRFRVPK EGSLKINDLI RGEVCWNLDT LGDFVVMRSN GQPVYNFCVT VDDATMAISH VIRAEEHLPN TLRQALIYKA LKFPMPQFAH VSLILAPDRS
301: KLSKRHGATS VGQYREMGYL PQGMVNYLAL LGWGDGTENE FFTLEDLVEK FSIERVNKSG AIFDSTKLRW MNGQHLRALP NEKLTKLVGE RWKSAGILTE
401: SEGSFVNEAV ELLKDGIELV TDSDKVLLNL LSYPLHATLA SPEAKPAVED KLHEVAASLI AAYDSGEIPS ALEEGQGAWQ KWVKAFGKSL KRKGKSLFMP
501: LRVLLTGKLH GPEMGTSIVL IYKAGSPGIV VPQAGFVSME ERFKILREID WEALNKDESV PLESTATVST

Arabidopsis Description

OVA3Glutamate--tRNA ligase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FEA2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.