CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 6
cytosol 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015037_P002	Maize	mitochondrion, plastid	91.77	93.07
Zm00001d053901_P001	Maize	mitochondrion, plastid	93.87	91.78
Os02t0121000-01	Rice	plastid	86.16	86.77
TraesCS6A01G070500.1	Wheat	plastid	80.39	82.11
TraesCS6B01G094500.1	Wheat	mitochondrion, plastid	80.39	81.96
TraesCS6D01G068300.1	Wheat	mitochondrion, plastid	80.21	81.93
HORVU6Hr1G012710.2	Barley	cytosol, plastid	80.03	79.76
GSMUA_Achr8P25460_001	Banana	mitochondrion	76.53	76.53
VIT_03s0038g04080.t01	Wine grape	plastid	74.08	74.73
CDX84484	Canola	plastid	73.2	73.85
KRH66310	Soybean	nucleus	71.45	72.99
CDY43784	Canola	plastid	72.33	72.97
AT5G64050.1	Thale cress	mitochondrion	72.5	72.63
KRH48974	Soybean	plastid	70.58	71.71
Solyc01g112290.2.1	Tomato	plastid	70.4	70.53
Bra024262.1-P	Field mustard	plastid	70.58	69.01
GSMUA_Achr11P...	Banana	cytosol	6.65	64.41

Protein Annotations

KEGG:00860+6.1.1.17	KEGG:00970+6.1.1.17	Gene3D:1.10.10.350	MapMan:17.2.7	Gene3D:3.40.50.620	MapMan:7.12.1.1
EntrezGene:8068257	UniProt:C5XT03	EnsemblPlants:EES06189	ProteinID:EES06189	ProteinID:EES06189.1	GO:GO:0000049
GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004812
GO:GO:0004818	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0006424	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0016874	GO:GO:0019538
GO:GO:0043039	InterPro:Glu-tRNA-ligase_bac/mito	InterPro:Glu/Gln-tRNA-synth	InterPro:Glu/Gln-tRNA-synth_Ib_cat-dom	InterPro:GluRS_core	InterPro:IPR014729
InterPro:IPR020751	HAMAP:MF_00022	PFAM:PF00749	PRINTS:PR00987	ScanProsite:PS00178	PANTHER:PTHR43311
PANTHER:PTHR43311:SF2	MetaCyc:PWY-5188	InterPro:Rossmann-like_a/b/a_fold	EnsemblPlantsGene:SORBI_3004G018100	SUPFAM:SSF48163	SUPFAM:SSF52374
unigene:Sbi.8021	TIGRFAMs:TIGR00464	UniParc:UPI0001A85F0F	RefSeq:XP_002453213.1	InterPro:aa-tRNA-synth_I_CS	InterPro:aa-tRNA-synth_I_codon-bd
InterPro:aa-tRNA-synth_I_codon-bd_sub2	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:1419816..1424664

Molecular Weight (calculated)

63139.2 Da

IEP (calculated)

6.964

GRAVY (calculated)

-0.307

Length

571 amino acids

Sequence
(BLAST)

001: MAASALLTGS PWLRMRLLPD APASPFRHLH LRRALSVRAS AAGTGTGTDG SSGPVRVRFA PSPTGNLHVG GARTALFNYL FARSKGGRFV LRVEDTDLER
101: STRKSEEAVL ADLAWLGLEW DEGPDVGGEF GPYRQSERNS LYKQYAEKLL DSGAVYRCFC SNEELEQMKE VAKQRQLPPV YMGKWASASD VEVQQELEKG
201: TPYTYRFRVP KEGSLKINDL IRGEVSWNLD TLGDFVIMRS NGQPVYNFCV TVDDATMQIS HVIRAEEHLP NTLRQALIYK ALGFSMPSFA HVSLILAPDR
301: SKLSKRHGAT SVGQYKEMGY LPQAMVNYLA LLGWGDGTEN EFFTIDNLVQ KFTINRVNKS GAVFDATKLK WMNGQHLRSF PHDELIKAFE DRWKNTGILQ
401: ESESGFAQEA AELLKDGIDL ITDADAALTN LLSYPLHTTL SSEEAKPVVQ DKISEVALSL ITAYDSGELT QALAEGRDGW QKWVKGFGKS IKRKGKGLFM
501: PLRVLLTGKL HGPDMGGSIA LIHKAGICGA VTSQSNFVTL DERFRILKEV DWESLAKEQE TPAESAVPAA S

Best Arabidopsis Sequence Match ( AT5G64050.1 )
(BLAST)

001: MASLVYGTPW LRVRSLPELA PAFLRRRQSS LFYCSRRSFA VVACSTPVNN GGSVRVRFAP SPTGNLHVGG ARTALFNYLF ARSKGGKFVL RIEDTDLERS
101: TRESEAAVLQ DLSWLGLDWD EGPGVSGDFG PYRQSERNAL YKQYAEKLLE SGHVYRCFCS SEELVKMKEN AKLKQLPPVY TGKWATASDA EIEQELEKGT
201: PFTYRFRVPK EGSLKINDLI RGEVCWNLDT LGDFVVMRSN GQPVYNFCVT VDDATMAISH VIRAEEHLPN TLRQALIYKA LKFPMPQFAH VSLILAPDRS
301: KLSKRHGATS VGQYREMGYL PQGMVNYLAL LGWGDGTENE FFTLEDLVEK FSIERVNKSG AIFDSTKLRW MNGQHLRALP NEKLTKLVGE RWKSAGILTE
401: SEGSFVNEAV ELLKDGIELV TDSDKVLLNL LSYPLHATLA SPEAKPAVED KLHEVAASLI AAYDSGEIPS ALEEGQGAWQ KWVKAFGKSL KRKGKSLFMP
501: LRVLLTGKLH GPEMGTSIVL IYKAGSPGIV VPQAGFVSME ERFKILREID WEALNKDESV PLESTATVST

Arabidopsis Description

OVA3Glutamate--tRNA ligase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FEA2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.