Factsheet for GSMUA_Achr9P01200_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr5P25020_001	plasma membrane
GSMUA_Achr6P20850_001	plasma membrane
GSMUA_Achr9P01200_001	plasma membrane
GSMUA_Achr9P15600_001
GSMUA_Achr9P29230_001	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13160.1	GSMUA_Achr9P15600_001	AT1G71020.1	21798944
AT5G13160.1	GSMUA_Achr5P25020_001	AT5G13160.1	24225654
AT5G13160.1	GSMUA_Achr6P20850_001	AT5G13160.1	24225654
AT5G13160.1	GSMUA_Achr9P01200_001	AT5G13160.1	24225654
AT5G13160.1	GSMUA_Achr9P29230_001	AT5G13160.1	24225654

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P29230_001	Banana	cytosol	84.86	55.66
GSMUA_Achr6P20850_001	Banana	cytosol	88.03	53.88
GSMUA_Achr6P15480_001	Banana	cytosol	69.01	50.78
GSMUA_Achr10P...	Banana	cytosol	68.31	50.13
GSMUA_Achr5P25020_001	Banana	cytosol	73.59	49.06
GSMUA_Achr5P29320_001	Banana	cytosol	62.32	48.49
GSMUA_Achr8P00160_001	Banana	cytosol	70.07	47.61
GSMUA_Achr6P15570_001	Banana	cytosol	63.73	47.38
GSMUA_Achr3P08930_001	Banana	cytosol	70.07	46.39
CDX85669	Canola	cytosol	70.07	46.06
CDX91145	Canola	cytosol	70.07	45.96
GSMUA_Achr10P...	Banana	cytosol	68.66	45.77
VIT_01s0146g00250.t01	Wine grape	cytosol	74.65	45.69
KRH36361	Soybean	cytosol	73.94	45.65
Bra006184.1-P	Field mustard	cytosol	70.42	45.25
GSMUA_Achr5P14180_001	Banana	cytosol, mitochondrion, plastid	54.93	45.22
GSMUA_Achr2P06850_001	Banana	cytosol	70.42	45.15
CDX78510	Canola	cytosol	70.42	45.15
GSMUA_AchrUn_...	Banana	cytosol	56.34	44.69
KRG93133	Soybean	cytosol	73.24	44.64
Solyc05g024290.2.1	Tomato	cytosol	72.54	44.3
Bra023393.1-P	Field mustard	cytosol	70.07	44.12
AT5G13160.1	Thale cress	cytosol	70.77	44.08
GSMUA_Achr10P...	Banana	cytosol, plastid	65.85	43.9
GSMUA_Achr9P23970_001	Banana	cytosol	58.1	43.88
KRH46858	Soybean	cytosol	72.18	43.71
CDX69664	Canola	cytosol	69.72	43.52
Bra008851.1-P	Field mustard	cytosol	69.72	43.52
CDX97232	Canola	cytosol	69.72	43.52
GSMUA_Achr8P02730_001	Banana	cytosol	57.04	43.43
PGSC0003DMT400021929	Potato	cytosol	71.48	43.38
GSMUA_Achr8P21930_001	Banana	cytosol, nucleus, plastid	71.48	43.1
GSMUA_Achr1P02780_001	Banana	cytosol	55.28	41.64
GSMUA_Achr11P...	Banana	cytosol	60.92	41.0
GSMUA_Achr4P25510_001	Banana	cytosol	37.32	40.93
GSMUA_Achr10P...	Banana	cytosol	65.14	40.66
GSMUA_Achr3P23170_001	Banana	cytosol	58.1	40.44
CDY53627	Canola	cytosol	69.72	40.24
GSMUA_AchrUn_...	Banana	plasma membrane	66.2	39.75
GSMUA_Achr4P18960_001	Banana	plasma membrane, plastid	59.51	39.03
GSMUA_Achr9P24960_001	Banana	cytosol	61.62	38.29
GSMUA_Achr11P...	Banana	plastid	52.11	34.66
GSMUA_Achr8P03680_001	Banana	cytosol	58.8	33.4
GSMUA_Achr9P17690_001	Banana	cytosol, nucleus, plastid	29.23	29.64
GSMUA_Achr5P26460_001	Banana	cytosol	61.97	22.39
GSMUA_Achr11P...	Banana	nucleus	54.93	11.28

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr9G01200_001	EnsemblPlants:GSMUA_Achr9P01200_001	EnsemblPlants:GSMUA_Achr9T01200_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0TWH7
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF100	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI00029625B7	:	:	:	:	:

Description

Serine/threonine-protein kinase PBS1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G01200_001]

Coordinates

chr9:-:930669..933883

Molecular Weight (calculated)

31565.5 Da

IEP (calculated)

5.418

GRAVY (calculated)

-0.366

Length

284 amino acids

Sequence
(BLAST)

001: MGCFPCFESE EEAQLSHGNE CDRTREERPM VAPRVEKLSS GDDRMKTARD LSTKRESLGA IEGSDFSISA QTFTFSELSA ATSNFRTESL LGEGGFGRVY
101: KGRLETTGQV VAVKQLDRNG LQGNREFLVE VLMLSLLHHP NLVNLIGYCA DGDQRLLVYE YMPLGSLEDH LHDFPPDKEP LDWNTRMKIA AGAAKGLEYL
201: HDKANPPVIY RDLKSSNILL DKGFHPKLSD FGLAKLEYAM TGQLTVKSDV YSFGVVLLEL ITGRKAVEST KSHSEQNLVS WSGI

Best Arabidopsis Sequence Match ( AT5G02800.1 )
(BLAST)

001: MGWIPCSGKS SGRNKTRRNG DHKLDRKSSD CSVSTSEKSR AKSSLSESKS KGSDHIVAQT FTFSELATAT RNFRKECLIG EGGFGRVYKG YLASTSQTAA
101: IKQLDHNGLQ GNREFLVEVL MLSLLHHPNL VNLIGYCADG DQRLLVYEYM PLGSLEDHLH DISPGKQPLD WNTRMKIAAG AAKGLEYLHD KTMPPVIYRD
201: LKCSNILLDD DYFPKLSDFG LAKLGPVGDK SHVSTRVMGT YGYCAPEYAM TGQLTLKSDV YSFGVVLLEI ITGRKAIDSS RSTGEQNLVA WARPLFKDRR
301: KFSQMADPML QGQYPPRGLY QALAVAAMCV QEQPNLRPLI ADVVTALSYL ASQKFDPLAQ PVQGSLFAPG TPPRSKRV

Arabidopsis Description

PBL7Probable serine/threonine-protein kinase PBL7 [Source:UniProtKB/Swiss-Prot;Acc:Q0WRY5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.