CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89279
KRG93133	plasma membrane
KRH36361	plasma membrane
KRH46858	plasma membrane
KRH50347

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13160.1	KRG89279	AT1G71020.1	21798944
AT5G13160.1	KRH50347	AT1G71020.1	21798944
AT5G13160.1	KRG93133	AT5G13160.1	24225654
AT5G13160.1	KRH36361	AT5G13160.1	24225654
AT5G13160.1	KRH46858	AT5G13160.1	24225654

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG93133	Soybean	cytosol	93.26	92.06
KRH46858	Soybean	cytosol	82.39	80.81
VIT_01s0146g00250.t01	Wine grape	cytosol	81.3	80.6
CDX85669	Canola	cytosol	74.35	79.17
Solyc05g024290.2.1	Tomato	cytosol	80.0	79.14
CDX91145	Canola	cytosol	74.35	78.98
AT5G13160.1	Thale cress	cytosol	77.61	78.29
PGSC0003DMT400021929	Potato	cytosol	79.13	77.78
Bra023393.1-P	Field mustard	cytosol	75.43	76.94
CDX97232	Canola	cytosol	75.87	76.7
CDX69664	Canola	cytosol	75.87	76.7
Bra008851.1-P	Field mustard	cytosol	75.87	76.7
Bra006184.1-P	Field mustard	cytosol	73.48	76.47
CDX78510	Canola	cytosol	73.26	76.07
GSMUA_Achr5P25020_001	Banana	cytosol	70.0	75.59
GSMUA_Achr9P01200_001	Banana	cytosol	45.65	73.94
GSMUA_Achr9P29230_001	Banana	cytosol	65.0	69.05
KRH67618	Soybean	cytosol	56.3	68.34
Os04t0393900-01	Rice	plasma membrane	67.39	68.28
KRG95902	Soybean	cytosol	56.3	68.16
KRH32375	Soybean	cytosol	56.52	67.89
KRH19781	Soybean	cytosol	56.3	67.62
CDY53627	Canola	cytosol	71.96	67.28
TraesCS2B01G302800.1	Wheat	cytosol, plastid	69.13	67.23
TraesCS2D01G284200.1	Wheat	cytosol	69.13	66.81
EES10653	Sorghum	cytosol	70.22	66.74
TraesCS2A01G285700.1	Wheat	cytosol, plastid	68.91	66.6
HORVU2Hr1G070690.2	Barley	cytosol	69.13	66.39
Zm00001d003925_P001	Maize	cytosol, nucleus, plastid	70.0	66.26
KRH11239	Soybean	cytosol, plastid	73.26	65.56
GSMUA_Achr6P20850_001	Banana	cytosol	66.09	65.52
KRH21034	Soybean	cytosol, plastid	72.39	64.91
EES05138	Sorghum	cytosol	71.52	64.26
Zm00001d016591_P002	Maize	cytosol	71.09	64.24
KRH51602	Soybean	cytosol, plastid	47.83	63.95
Zm00001d050575_P001	Maize	cytosol	71.52	63.51
Os02t0513000-01	Rice	plasma membrane	71.3	62.36
KRH14431	Soybean	cytosol	50.87	61.74
KRH73720	Soybean	plastid	50.65	61.48
KRH60919	Soybean	cytosol	47.83	61.28
KRH46760	Soybean	cytosol	55.43	58.35
KRH06009	Soybean	cytosol, plastid	44.57	57.42
KRH24971	Soybean	cytosol	51.74	57.35
KRG88698	Soybean	cytosol	51.74	57.21
KRH46122	Soybean	cytosol	50.43	56.31
KRG94631	Soybean	extracellular	48.91	54.35
KRH06889	Soybean	cytosol	48.91	53.07
KRG99800	Soybean	cytosol	55.0	52.6
KRH11410	Soybean	plastid	44.35	52.31
KRH10353	Soybean	cytosol	52.17	49.48
KRH22964	Soybean	cytosol	51.09	49.47
KRH20875	Soybean	cytosol, plastid	43.7	47.29
KRH68843	Soybean	cytosol	48.91	38.79
KRG97093	Soybean	cytosol	48.48	37.54
KRG92591	Soybean	cytosol	45.65	33.93
KRH34195	Soybean	cytosol	45.87	33.55

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100305406	MapMan:18.4.1.37.1	MapMan:26.8.1.2.3	Gene3D:3.30.200.20	EMBL:ACUP02006725
ncoils:Coil	EnsemblPlantsGene:GLYMA_10G298400	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	UniProt:I1LFL9	InterPro:IPR000719
EnsemblPlants:KRH36361	ProteinID:KRH36361	ProteinID:KRH36361.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000615
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF100	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00023CE6DC	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:+:51496486..51499672

Molecular Weight (calculated)

51021.3 Da

IEP (calculated)

6.798

GRAVY (calculated)

-0.587

Length

460 amino acids

Sequence
(BLAST)

001: MGCFSCFDSR EDEMLNPNPQ QENHHHEHEH DHDLKPPVPS RISRLPPSAS AGDKLRSTTS NGESKRELAA AVQIAAQIFT FRELAAATKN FMPQSFLGEG
101: GFGRVYKGLL ETTGQVVAVK QLDRDGLQGN REFLVEVLML SLLHHPNLVN LIGYCADGDQ RLLVYEFMPL GSLEDHLHDL PPDKEPLDWN TRMKIAAGAA
201: KGLEYLHDKA NPPVIYRDFK SSNILLDEGY HPKLSDFGLA KLGPVGDKSH VSTRVMGTYG YCAPEYAMTG QLTVKSDVYS FGVVFLELIT GRKAIDSTRP
301: HGEQNLVTWA RPLFNDRRKF PKLADPQLQG RYPMRGLYQA LAVASMCIQE QAAARPLIGD VVTALSFLAN QAYDHRGGTG DDKRNRVLKN GEGGGGGSGG
401: RWDLEGSEKD DSPRETARML NSNNRDLDRE RAVAEAKMWG ENWREKRRQS AQGSFDGSNA

Best Arabidopsis Sequence Match ( AT5G02800.1 )
(BLAST)

001: MGWIPCSGKS SGRNKTRRNG DHKLDRKSSD CSVSTSEKSR AKSSLSESKS KGSDHIVAQT FTFSELATAT RNFRKECLIG EGGFGRVYKG YLASTSQTAA
101: IKQLDHNGLQ GNREFLVEVL MLSLLHHPNL VNLIGYCADG DQRLLVYEYM PLGSLEDHLH DISPGKQPLD WNTRMKIAAG AAKGLEYLHD KTMPPVIYRD
201: LKCSNILLDD DYFPKLSDFG LAKLGPVGDK SHVSTRVMGT YGYCAPEYAM TGQLTLKSDV YSFGVVLLEI ITGRKAIDSS RSTGEQNLVA WARPLFKDRR
301: KFSQMADPML QGQYPPRGLY QALAVAAMCV QEQPNLRPLI ADVVTALSYL ASQKFDPLAQ PVQGSLFAPG TPPRSKRV

Arabidopsis Description

PBL7Probable serine/threonine-protein kinase PBL7 [Source:UniProtKB/Swiss-Prot;Acc:Q0WRY5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.