Factsheet for TraesCS2B01G302800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G285700.1	plasma membrane
TraesCS2B01G302800.1	plasma membrane
TraesCS2D01G284200.1	plasma membrane
TraesCS6A01G293600.1
TraesCS6B01G324000.1
TraesCS6D01G274500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13160.1	TraesCS6A01G293600.1	AT1G71020.1	21798944
AT5G13160.1	TraesCS6B01G324000.1	AT1G71020.1	21798944
AT5G13160.1	TraesCS6D01G274500.1	AT1G71020.1	21798944
AT5G13160.1	TraesCS2A01G285700.1	AT5G13160.1	24225654
AT5G13160.1	TraesCS2B01G302800.1	AT5G13160.1	24225654
AT5G13160.1	TraesCS2D01G284200.1	AT5G13160.1	24225654

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G284200.1	Wheat	cytosol	99.58	98.95
TraesCS2A01G285700.1	Wheat	cytosol, plastid	98.94	98.32
HORVU2Hr1G070690.2	Barley	cytosol	99.15	97.91
Os04t0393900-01	Rice	plasma membrane	80.55	83.92
EES10653	Sorghum	cytosol	85.2	83.26
Zm00001d003925_P001	Maize	cytosol, nucleus, plastid	84.36	82.1
GSMUA_Achr5P25020_001	Banana	cytosol	64.69	71.83
CDX85669	Canola	cytosol	64.27	70.37
CDX91145	Canola	cytosol	64.27	70.21
VIT_01s0146g00250.t01	Wine grape	cytosol	68.71	70.04
Bra023393.1-P	Field mustard	cytosol	65.96	69.18
KRH36361	Soybean	cytosol	67.23	69.13
CDX97232	Canola	cytosol	65.96	68.57
CDX69664	Canola	cytosol	65.96	68.57
Bra008851.1-P	Field mustard	cytosol	65.96	68.57
AT5G13160.1	Thale cress	cytosol	65.96	68.42
KRG93133	Soybean	cytosol	67.23	68.24
KRH46858	Soybean	cytosol	67.65	68.23
Solyc05g024290.2.1	Tomato	cytosol	65.96	67.1
Bra006184.1-P	Field mustard	cytosol	62.58	66.97
CDX78510	Canola	cytosol	62.37	66.59
PGSC0003DMT400021929	Potato	cytosol	65.33	66.03
TraesCS2B01G096000.1	Wheat	cytosol, plastid	54.97	64.36
TraesCS1B01G247100.1	Wheat	cytosol	63.0	63.14
TraesCS3B01G506600.1	Wheat	cytosol	62.58	61.8
CDY53627	Canola	cytosol	64.27	61.79
TraesCS2B01G137800.2	Wheat	plastid	55.18	55.89
TraesCS3B01G206500.1	Wheat	cytosol	51.59	52.59
TraesCS4B01G198900.1	Wheat	plastid	41.01	52.57
TraesCS3B01G603300.1	Wheat	cytosol, plastid	43.34	49.88
TraesCS1B01G085000.1	Wheat	plastid	46.51	49.22
TraesCS6B01G470200.1	Wheat	mitochondrion, plastid	39.53	48.2
TraesCS3B01G355700.1	Wheat	plastid	43.97	46.85
TraesCS4B01G000300.1	Wheat	cytosol	43.76	45.49
TraesCS1B01G297300.1	Wheat	cytosol	38.27	42.59
TraesCS1B01G329700.1	Wheat	plastid	45.45	38.74

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.2.3	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0002221
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009816
GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0042742
GO:GO:0045087	GO:GO:0046777	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000615
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF287	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS2B01G302800	EnsemblPlants:TraesCS2B01G302800.1	TIGR:cd14066
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:427948498..427952893

Molecular Weight (calculated)

51311.9 Da

IEP (calculated)

8.123

GRAVY (calculated)

-0.489

Length

473 amino acids

Sequence
(BLAST)

001: MGCFPCFDSG SDGELLYPKQ GGGNGTSGRT APAASSSGVG AREERPMVPP RVEKLPAGAE KARAKGNAGM KELSDLRDAN GNVLSAQTFT FRQLTAATRN
101: FREECFIGEG GFGRVYKGRL DGGQVVAIKQ LNRDGNQGNK EFLVEVLMLS LLHHQNLVNL VGYCADGEQR LLVYEYMPLG SLEDHLHDLP PDKEPLDWNT
201: RMKIAAGAAK GLEYLHDKAQ PPVIYRDFKS SNILLGDDFH PKLSDFGLAK LGPVGDKSHV STRVMGTYGY CAPEYAMTGQ LTVKSDVYSF GVVLLELITG
301: RKAIDSTRPH GEQNLVSWAR PLFNDRRKLP KMADPGLQGR YPMRGLYQAL AVASMCIQSE AASRPLIADV VTALSYLASQ IYDPNAIHAS KKAGGDQRSR
401: VSDSGRTLLK NDEAGSSGHK SDRDDSPREP PPGILNDRER MVAEAKMWGA NLREKTRAAA NAQGSLDSPT ETG

Best Arabidopsis Sequence Match ( AT5G13160.1 )
(BLAST)

001: MGCFSCFDSS DDEKLNPVDE SNHGQKKQSQ PTVSNNISGL PSGGEKLSSK TNGGSKRELL LPRDGLGQIA AHTFAFRELA AATMNFHPDT FLGEGGFGRV
101: YKGRLDSTGQ VVAVKQLDRN GLQGNREFLV EVLMLSLLHH PNLVNLIGYC ADGDQRLLVY EFMPLGSLED HLHDLPPDKE ALDWNMRMKI AAGAAKGLEF
201: LHDKANPPVI YRDFKSSNIL LDEGFHPKLS DFGLAKLGPT GDKSHVSTRV MGTYGYCAPE YAMTGQLTVK SDVYSFGVVF LELITGRKAI DSEMPHGEQN
301: LVAWARPLFN DRRKFIKLAD PRLKGRFPTR ALYQALAVAS MCIQEQAATR PLIADVVTAL SYLANQAYDP SKDDSRRNRD ERGARLITRN DDGGGSGSKF
401: DLEGSEKEDS PRETARILNR DINRERAVAE AKMWGESLRE KRRQSEQGTS ESNSTG

Arabidopsis Description

PBS1AvrPphB susceptible 1 [Source:UniProtKB/TrEMBL;Acc:B2BDM5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.