Factsheet for Os04t0393900-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0513000-01	plasma membrane
Os02t0732200-01
Os04t0393900-01	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13160.1	Os02t0732200-01	AT1G71020.1	21798944
AT5G13160.1	Os02t0513000-01	AT5G13160.1	24225654
AT5G13160.1	Os04t0393900-01	AT5G13160.1	24225654

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G302800.1	Wheat	cytosol, plastid	83.92	80.55
TraesCS2D01G284200.1	Wheat	cytosol	83.92	80.04
HORVU2Hr1G070690.2	Barley	cytosol	84.14	79.75
TraesCS2A01G285700.1	Wheat	cytosol, plastid	83.48	79.62
Zm00001d003925_P001	Maize	cytosol, nucleus, plastid	82.6	77.16
EES10653	Sorghum	cytosol	81.94	76.86
GSMUA_Achr5P25020_001	Banana	cytosol	67.18	71.6
Os02t0513000-01	Rice	plasma membrane	79.96	69.01
VIT_01s0146g00250.t01	Wine grape	cytosol	69.82	68.32
CDX85669	Canola	cytosol	64.76	68.06
CDX91145	Canola	cytosol	64.76	67.9
KRH36361	Soybean	cytosol	68.28	67.39
Bra023393.1-P	Field mustard	cytosol	66.74	67.18
KRH46858	Soybean	cytosol	68.72	66.52
KRG93133	Soybean	cytosol	67.84	66.09
Solyc05g024290.2.1	Tomato	cytosol	67.62	66.02
AT5G13160.1	Thale cress	cytosol	66.3	66.01
CDX97232	Canola	cytosol	66.08	65.93
CDX69664	Canola	cytosol	66.08	65.93
Bra008851.1-P	Field mustard	cytosol	66.08	65.93
Os07t0695300-01	Rice	cytosol, plastid	56.39	65.64
Bra006184.1-P	Field mustard	cytosol	63.88	65.61
PGSC0003DMT400021929	Potato	cytosol	67.18	65.17
CDX78510	Canola	cytosol	63.44	65.01
Os01t0936100-01	Rice	plasma membrane	65.2	60.29
CDY53627	Canola	cytosol	65.2	60.16
Os05t0372100-01	Rice	cytosol, nucleus, plastid	64.1	59.27
Os07t0668900-01	Rice	plasma membrane	58.81	55.74
Os03t0130900-01	Rice	cytosol	43.61	51.97
Os01t0259200-02	Rice	plasma membrane	51.54	51.43
Os09t0572600-01	Rice	mitochondrion	46.7	50.6
Os03t0283900-01	Rice	plasma membrane	42.07	49.35
Os02t0833000-01	Rice	plasma membrane	39.87	49.18
Os05t0125400-00	Rice	cytosol	47.36	48.86
Os01t0789200-01	Rice	mitochondrion, plastid	48.02	46.68
Os05t0498900-01	Rice	plastid	48.24	45.25
Os05t0463000-01	Rice	cytosol, mitochondrion, plastid	41.41	45.08

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.2.3	Gene3D:3.30.200.20	UniProt:A0A0P0W9R3	ProteinID:BAS88987.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os04g0393900	EnsemblPlants:Os04t0393900-01
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF287	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0003939EB0
SEG:seg	:	:	:	:	:

Description

RECEPTOR-LIKE CYTOPLASMIC KINASE 149Similar to H0718E12.2 protein. (Os04t0393900-01)

Coordinates

chr4:+:19365855..19371100

Molecular Weight (calculated)

49845.7 Da

IEP (calculated)

10.260

GRAVY (calculated)

-0.493

Length

454 amino acids

Sequence
(BLAST)

001: MGVALCRLLL RRRRRPPASA AVGGRGRLRR RRASRRSPHG ARGRGNATVK KELSALKDAN GNVISAQTFT FRQLAAATRN FREECFIGEG GFGRVYKGRL
101: DGTGQIVAIK QLNRDGTQGN KEFLVEVLML SLLHHQNLVN LVGYCADGDQ RLLVYEYMPL GSLEDHLHDL PPDKVPLDWN TRMKIAAGAA KGLEYLHDKA
201: QPPVIYRDFK SSNILLGEDF HPKLSDFGLA KLGPVGDKSH VSTRVMGTYG YCAPEYAMTG QLTVKSDVYS FGVVLLELIT GRKAIDSTRP HVEQNLVSWA
301: RPLFNDRRKL PKMADPGLEG RYPMRGLYQA LAVASMCIQS EAASRPLIAD VVTALSYLAS QKYDPNTTPS SKKAGGGEAG RALSRNDEAG SSGHKSPSSK
401: DSPREQQLPG ILNDRERMVA EAKMWGENWR EKRRAAATTS SNAQVSLDSP TETG

Best Arabidopsis Sequence Match ( AT5G13160.1 )
(BLAST)

001: MGCFSCFDSS DDEKLNPVDE SNHGQKKQSQ PTVSNNISGL PSGGEKLSSK TNGGSKRELL LPRDGLGQIA AHTFAFRELA AATMNFHPDT FLGEGGFGRV
101: YKGRLDSTGQ VVAVKQLDRN GLQGNREFLV EVLMLSLLHH PNLVNLIGYC ADGDQRLLVY EFMPLGSLED HLHDLPPDKE ALDWNMRMKI AAGAAKGLEF
201: LHDKANPPVI YRDFKSSNIL LDEGFHPKLS DFGLAKLGPT GDKSHVSTRV MGTYGYCAPE YAMTGQLTVK SDVYSFGVVF LELITGRKAI DSEMPHGEQN
301: LVAWARPLFN DRRKFIKLAD PRLKGRFPTR ALYQALAVAS MCIQEQAATR PLIADVVTAL SYLANQAYDP SKDDSRRNRD ERGARLITRN DDGGGSGSKF
401: DLEGSEKEDS PRETARILNR DINRERAVAE AKMWGESLRE KRRQSEQGTS ESNSTG

Arabidopsis Description

PBS1AvrPphB susceptible 1 [Source:UniProtKB/TrEMBL;Acc:B2BDM5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.