CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES05138	plasma membrane
EES07310
EES10653	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13160.1	EES07310	AT1G71020.1	21798944
AT5G13160.1	EES05138	AT5G13160.1	24225654
AT5G13160.1	EES10653	AT5G13160.1	24225654

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003925_P001	Maize	cytosol, nucleus, plastid	96.28	95.88
TraesCS2D01G284200.1	Wheat	cytosol	83.88	85.29
TraesCS2B01G302800.1	Wheat	cytosol, plastid	83.26	85.2
HORVU2Hr1G070690.2	Barley	cytosol	83.88	84.76
TraesCS2A01G285700.1	Wheat	cytosol, plastid	83.26	84.66
Os04t0393900-01	Rice	plasma membrane	76.86	81.94
GSMUA_Achr5P25020_001	Banana	cytosol	64.88	73.71
EES05138	Sorghum	cytosol	77.27	73.05
VIT_01s0146g00250.t01	Wine grape	cytosol	68.8	71.77
CDX85669	Canola	cytosol	63.84	71.53
CDX91145	Canola	cytosol	63.84	71.36
AT5G13160.1	Thale cress	cytosol	66.32	70.39
KRH36361	Soybean	cytosol	66.74	70.22
Bra023393.1-P	Field mustard	cytosol	65.08	69.84
KRH46858	Soybean	cytosol	67.36	69.51
CDX97232	Canola	cytosol	65.08	69.23
CDX69664	Canola	cytosol	65.08	69.23
Bra008851.1-P	Field mustard	cytosol	65.08	69.23
KRG93133	Soybean	cytosol	66.53	69.1
Solyc05g024290.2.1	Tomato	cytosol	65.5	68.17
Bra006184.1-P	Field mustard	cytosol	61.98	67.87
CDX78510	Canola	cytosol	61.78	67.49
PGSC0003DMT400021929	Potato	cytosol	64.67	66.88
EER97804	Sorghum	cytosol	53.1	63.61
EES18123	Sorghum	plastid	61.16	62.45
EES18122	Sorghum	plastid	61.16	62.45
CDY53627	Canola	cytosol	63.02	61.99
EER99879	Sorghum	plastid	56.82	59.78
EES00508	Sorghum	cytosol	51.03	53.7
EER95576	Sorghum	cytosol	40.91	52.52
EES17638	Sorghum	peroxisome, plastid	47.31	51.23
EER96397	Sorghum	cytosol	42.98	48.83
EES01588	Sorghum	plastid	45.45	48.46
KXG39633	Sorghum	plastid	38.43	46.5
EES19660	Sorghum	cytosol	39.88	45.09
EES19760	Sorghum	plastid	46.49	44.73
OQU86038	Sorghum	plastid	39.67	41.83

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.2.3	Gene3D:3.30.200.20	EntrezGene:8071855	UniProt:C5YEV8
EnsemblPlants:EES10653	ProteinID:EES10653	ProteinID:EES10653.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF287	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	EnsemblPlantsGene:SORBI_3006G054700	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A86A82	RefSeq:XP_002446325.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:+:39641338..39646462

Molecular Weight (calculated)

51990.4 Da

IEP (calculated)

9.034

GRAVY (calculated)

-0.466

Length

484 amino acids

Sequence
(BLAST)

001: MGCFPCFGST SDEELKYYGA LGGNGGGVGR AAASSSSSSS AAGGGGRAEE AVVAPPRVAR DHAGADKARA KGNAGSKKEL SVLRDASGNV ISAQTFTFRQ
101: LAAATKNFRD ECFIGEGGFG RVYKGRLDMG QVVAIKQLNR DGNQGNKEFL VEVLMLSLLH HQNLVNLVGY CADGDQRLLV YEYMPLGSLE DHLHDLPPDK
201: EPLDWNTRMK IAAGAAKGLE YLHDKAQPPV IYRDFKSSNI LLGEGFHPKL SDFGLAKLGP VGDKSHVSTR VMGTYGYCAP EYAMTGQLTV KSDVYSFGVV
301: LLELITGRKA IDSTRPASEQ NLVSWARPLF NDRRKLPKMA DPGLEGRFPT RGLYQALAVA SMCIQSEAAS RPLIADVVTA LSYLANQIYD PSLAHTSKKA
401: GGSDQRNRVG DSGRVLSKND DAGSSGHRSP SKDRADSPRE QFPGAANRGQ DRERMVAEAK MWGENWREKR RAAQGSLDSP TGGG

Best Arabidopsis Sequence Match ( AT5G13160.1 )
(BLAST)

001: MGCFSCFDSS DDEKLNPVDE SNHGQKKQSQ PTVSNNISGL PSGGEKLSSK TNGGSKRELL LPRDGLGQIA AHTFAFRELA AATMNFHPDT FLGEGGFGRV
101: YKGRLDSTGQ VVAVKQLDRN GLQGNREFLV EVLMLSLLHH PNLVNLIGYC ADGDQRLLVY EFMPLGSLED HLHDLPPDKE ALDWNMRMKI AAGAAKGLEF
201: LHDKANPPVI YRDFKSSNIL LDEGFHPKLS DFGLAKLGPT GDKSHVSTRV MGTYGYCAPE YAMTGQLTVK SDVYSFGVVF LELITGRKAI DSEMPHGEQN
301: LVAWARPLFN DRRKFIKLAD PRLKGRFPTR ALYQALAVAS MCIQEQAATR PLIADVVTAL SYLANQAYDP SKDDSRRNRD ERGARLITRN DDGGGSGSKF
401: DLEGSEKEDS PRETARILNR DINRERAVAE AKMWGESLRE KRRQSEQGTS ESNSTG

Arabidopsis Description

PBS1AvrPphB susceptible 1 [Source:UniProtKB/TrEMBL;Acc:B2BDM5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.