Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G13160.1 | KRG89279 | AT1G71020.1 | 21798944 |
| AT5G13160.1 | KRH50347 | AT1G71020.1 | 21798944 |
| AT5G13160.1 | KRG93133 | AT5G13160.1 | 24225654 |
| AT5G13160.1 | KRH36361 | AT5G13160.1 | 24225654 |
| AT5G13160.1 | KRH46858 | AT5G13160.1 | 24225654 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH36361 | Soybean | cytosol | 80.81 | 82.39 |
| KRG93133 | Soybean | cytosol | 81.45 | 81.97 |
| Solyc05g024290.2.1 | Tomato | cytosol | 78.89 | 79.57 |
| VIT_01s0146g00250.t01 | Wine grape | cytosol | 78.68 | 79.53 |
| Bra008851.1-P | Field mustard | cytosol | 76.76 | 79.12 |
| CDX69664 | Canola | cytosol | 76.76 | 79.12 |
| CDX97232 | Canola | cytosol | 76.76 | 79.12 |
| AT5G13160.1 | Thale cress | cytosol | 76.76 | 78.95 |
| CDX85669 | Canola | cytosol | 72.49 | 78.7 |
| CDX91145 | Canola | cytosol | 72.49 | 78.52 |
| PGSC0003DMT400021929 | Potato | cytosol | 77.83 | 77.99 |
| Bra023393.1-P | Field mustard | cytosol | 74.63 | 77.61 |
| Bra006184.1-P | Field mustard | cytosol | 72.49 | 76.92 |
| CDX78510 | Canola | cytosol | 72.28 | 76.52 |
| GSMUA_Achr5P25020_001 | Banana | cytosol | 69.08 | 76.06 |
| GSMUA_Achr9P01200_001 | Banana | cytosol | 43.71 | 72.18 |
| CDY53627 | Canola | cytosol | 72.92 | 69.51 |
| KRG95902 | Soybean | cytosol | 56.08 | 69.21 |
| KRH67618 | Soybean | cytosol | 55.86 | 69.13 |
| KRH32375 | Soybean | cytosol | 56.29 | 68.93 |
| GSMUA_Achr9P29230_001 | Banana | cytosol | 63.54 | 68.82 |
| Os04t0393900-01 | Rice | plasma membrane | 66.52 | 68.72 |
| KRH19781 | Soybean | cytosol | 56.08 | 68.67 |
| TraesCS2B01G302800.1 | Wheat | cytosol, plastid | 68.23 | 67.65 |
| EES10653 | Sorghum | cytosol | 69.51 | 67.36 |
| TraesCS2D01G284200.1 | Wheat | cytosol | 68.23 | 67.23 |
| TraesCS2A01G285700.1 | Wheat | cytosol, plastid | 68.02 | 67.02 |
| Zm00001d003925_P001 | Maize | cytosol, nucleus, plastid | 69.3 | 66.87 |
| HORVU2Hr1G070690.2 | Barley | cytosol | 68.23 | 66.81 |
| KRH11239 | Soybean | cytosol, plastid | 72.28 | 65.95 |
| GSMUA_Achr6P20850_001 | Banana | cytosol | 64.61 | 65.3 |
| KRH21034 | Soybean | cytosol, plastid | 71.22 | 65.11 |
| EES05138 | Sorghum | cytosol | 70.36 | 64.45 |
| Zm00001d016591_P002 | Maize | cytosol | 69.51 | 64.05 |
| Zm00001d050575_P001 | Maize | cytosol | 70.15 | 63.51 |
| KRH51602 | Soybean | cytosol, plastid | 46.48 | 63.37 |
| Os02t0513000-01 | Rice | plasma membrane | 70.15 | 62.55 |
| KRH14431 | Soybean | cytosol | 50.53 | 62.53 |
| KRH73720 | Soybean | plastid | 50.32 | 62.27 |
| KRH60919 | Soybean | cytosol | 46.48 | 60.72 |
| KRH46760 | Soybean | cytosol | 55.65 | 59.73 |
| KRH06009 | Soybean | cytosol, plastid | 43.92 | 57.7 |
| KRH24971 | Soybean | cytosol | 50.96 | 57.59 |
| KRG88698 | Soybean | cytosol | 50.75 | 57.21 |
| KRH46122 | Soybean | cytosol | 48.83 | 55.58 |
| KRG94631 | Soybean | extracellular | 47.55 | 53.86 |
| KRG99800 | Soybean | cytosol | 55.22 | 53.85 |
| KRH11410 | Soybean | plastid | 44.35 | 53.33 |
| KRH06889 | Soybean | cytosol | 47.33 | 52.36 |
| KRH10353 | Soybean | cytosol | 51.39 | 49.69 |
| KRH22964 | Soybean | cytosol | 50.32 | 49.68 |
| KRH20875 | Soybean | cytosol, plastid | 43.71 | 48.24 |
| KRH68843 | Soybean | cytosol | 47.76 | 38.62 |
| KRG97093 | Soybean | cytosol | 47.76 | 37.71 |
| KRG92591 | Soybean | cytosol | 44.56 | 33.76 |
| KRH34195 | Soybean | cytosol | 44.56 | 33.23 |
Protein Annotations
| Gene3D:1.10.510.10 | EntrezGene:100305422 | MapMan:18.4.1.37.1 | MapMan:26.8.1.2.3 | Gene3D:3.30.200.20 | UniProt:A0A0R0IXX0 |
| EMBL:ACUP02005362 | EnsemblPlantsGene:GLYMA_08G360600 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| EnsemblPlants:KRH46858 | ProteinID:KRH46858 | ProteinID:KRH46858.1 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PIRSF:PIRSF000615 |
| ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27001 | PANTHER:PTHR27001:SF100 | InterPro:Prot_kinase_dom |
| InterPro:Protein_kinase_ATP_BS | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0003DEB4EC | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr8:-:47241639..47245995
Molecular Weight (calculated)
52308.2 Da
IEP (calculated)
8.594
GRAVY (calculated)
-0.567
Length
469 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCFCEFHCK ATFLCLGINK MGCFSCFDSS SKEDHNLRPQ HQPNQPLPSQ ISRLPSGADK LRSRSNGGSK RELQQPPPTV QIAAQTFTFR ELAAATKNFR
101: PESFVGEGGF GRVYKGRLET TAQIVAVKQL DKNGLQGNRE FLVEVLMLSL LHHPNLVNLI GYCADGDQRL LVYEFMPLGS LEDHLHDLPP DKEPLDWNTR
201: MKIAVGAAKG LEYLHDKANP PVIYRDFKSS NILLDEGYHP KLSDFGLAKL GPVGDKSHVS TRVMGTYGYC APEYAMTGQL TVKSDVYSFG VVFLELITGR
301: KAIDSTQPQG EQNLVTWARP LFNDRRKFSK LADPRLQGRF PMRGLYQALA VASMCIQESA ATRPLIGDVV TALSYLANQA YDPNGYRGSS DDKRNRDDKG
401: GRISKNDEAG GSGRRWDLEG SEKDDSPRET ARILNRDLDR ERAVAEAKMW GENLRQKRKQ SLQQGSLDA
101: PESFVGEGGF GRVYKGRLET TAQIVAVKQL DKNGLQGNRE FLVEVLMLSL LHHPNLVNLI GYCADGDQRL LVYEFMPLGS LEDHLHDLPP DKEPLDWNTR
201: MKIAVGAAKG LEYLHDKANP PVIYRDFKSS NILLDEGYHP KLSDFGLAKL GPVGDKSHVS TRVMGTYGYC APEYAMTGQL TVKSDVYSFG VVFLELITGR
301: KAIDSTQPQG EQNLVTWARP LFNDRRKFSK LADPRLQGRF PMRGLYQALA VASMCIQESA ATRPLIGDVV TALSYLANQA YDPNGYRGSS DDKRNRDDKG
401: GRISKNDEAG GSGRRWDLEG SEKDDSPRET ARILNRDLDR ERAVAEAKMW GENLRQKRKQ SLQQGSLDA
001: MGCFSCFDSS DDEKLNPVDE SNHGQKKQSQ PTVSNNISGL PSGGEKLSSK TNGGSKRELL LPRDGLGQIA AHTFAFRELA AATMNFHPDT FLGEGGFGRV
101: YKGRLDSTGQ VVAVKQLDRN GLQGNREFLV EVLMLSLLHH PNLVNLIGYC ADGDQRLLVY EFMPLGSLED HLHDLPPDKE ALDWNMRMKI AAGAAKGLEF
201: LHDKANPPVI YRDFKSSNIL LDEGFHPKLS DFGLAKLGPT GDKSHVSTRV MGTYGYCAPE YAMTGQLTVK SDVYSFGVVF LELITGRKAI DSEMPHGEQN
301: LVAWARPLFN DRRKFIKLAD PRLKGRFPTR ALYQALAVAS MCIQEQAATR PLIADVVTAL SYLANQAYDP SKDDSRRNRD ERGARLITRN DDGGGSGSKF
401: DLEGSEKEDS PRETARILNR DINRERAVAE AKMWGESLRE KRRQSEQGTS ESNSTG
101: YKGRLDSTGQ VVAVKQLDRN GLQGNREFLV EVLMLSLLHH PNLVNLIGYC ADGDQRLLVY EFMPLGSLED HLHDLPPDKE ALDWNMRMKI AAGAAKGLEF
201: LHDKANPPVI YRDFKSSNIL LDEGFHPKLS DFGLAKLGPT GDKSHVSTRV MGTYGYCAPE YAMTGQLTVK SDVYSFGVVF LELITGRKAI DSEMPHGEQN
301: LVAWARPLFN DRRKFIKLAD PRLKGRFPTR ALYQALAVAS MCIQEQAATR PLIADVVTAL SYLANQAYDP SKDDSRRNRD ERGARLITRN DDGGGSGSKF
401: DLEGSEKEDS PRETARILNR DINRERAVAE AKMWGESLRE KRRQSEQGTS ESNSTG
Arabidopsis Description
PBS1AvrPphB susceptible 1 [Source:UniProtKB/TrEMBL;Acc:B2BDM5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.