CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH10294
KRH23029
KRH24840
KRH29844

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02800.1	KRH10294	AT3G46090.1	17259181
AT5G02800.1	KRH23029	AT3G46090.1	17259181
AT5G02800.1	KRH24840	AT3G46090.1	17259181
AT5G02800.1	KRH29844	AT3G46090.1	17259181

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32375	Soybean	cytosol	97.13	97.13
KRG95902	Soybean	cytosol	89.82	90.53
KRH67618	Soybean	cytosol	89.56	90.5
VIT_08s0040g03060.t01	Wine grape	nucleus	81.72	79.04
Solyc10g085990.1.1	Tomato	plastid	76.24	78.71
PGSC0003DMT400045344	Potato	plastid	76.24	78.71
CDY55687	Canola	plastid	76.76	78.4
AT5G02800.1	Thale cress	plastid	77.28	78.31
Bra028862.1-P	Field mustard	plastid	76.5	77.93
CDY04867	Canola	plastid	76.24	77.66
GSMUA_Achr6P15480_001	Banana	cytosol	77.28	76.68
GSMUA_Achr10P...	Banana	cytosol	75.98	75.19
PGSC0003DMT400071735	Potato	cytosol, mitochondrion, nucleus	76.5	75.13
Solyc09g007170.2.1	Tomato	cytosol, mitochondrion, nucleus	76.24	74.68
GSMUA_AchrUn_...	Banana	plasma membrane	77.28	62.58
KRH24971	Soybean	cytosol	67.62	62.41
KRH14431	Soybean	cytosol	61.36	62.01
KRG88698	Soybean	cytosol	67.1	61.78
KRH73720	Soybean	plastid	61.1	61.74
KRH51602	Soybean	cytosol, plastid	55.35	61.63
GSMUA_Achr10P...	Banana	cytosol	70.23	59.12
KRH60919	Soybean	cytosol	55.35	59.05
KRH06009	Soybean	cytosol, plastid	54.57	58.54
KRH36361	Soybean	cytosol	67.62	56.3
KRG93133	Soybean	cytosol	68.41	56.22
KRH46858	Soybean	cytosol	68.67	56.08
KRH11239	Soybean	cytosol, plastid	74.93	55.84
KRH21034	Soybean	cytosol, plastid	74.67	55.75
KRH46122	Soybean	cytosol	58.22	54.13
KRH46760	Soybean	cytosol	61.1	53.55
KRH22964	Soybean	cytosol	65.01	52.42
KRH10353	Soybean	cytosol	66.32	52.37
KRH11410	Soybean	plastid	52.22	51.28
KRG94631	Soybean	extracellular	52.48	48.55
KRG99800	Soybean	cytosol	59.27	47.19
KRH06889	Soybean	cytosol	51.7	46.7
KRH20875	Soybean	cytosol, plastid	51.44	46.35
KRH68843	Soybean	cytosol	52.74	34.83
KRG97093	Soybean	cytosol	52.22	33.67
KRH34195	Soybean	cytosol	49.61	30.21
KRG92591	Soybean	cytosol	48.56	30.05

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100776041	MapMan:18.4.1.37.1	MapMan:26.8.1.2.3	Gene3D:3.30.200.20	EMBL:ACUP02008205
ncoils:Coil	EnsemblPlantsGene:GLYMA_13G135800	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	UniProt:I1LYZ2	InterPro:IPR000719
EnsemblPlants:KRH19781	ProteinID:KRH19781	ProteinID:KRH19781.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF513	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233AC49
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:24820151..24823999

Molecular Weight (calculated)

42360.3 Da

IEP (calculated)

10.008

GRAVY (calculated)

-0.384

Length

383 amino acids

Sequence
(BLAST)

001: MGWIPCSGSS NTKKKLKKKL EKMEGQSSLV DPIKATPGKL KRNPSMNSKN SSKNGNPEHI AAQTFSFREL ATATRNFRAE CLLGEGGFGR VYKGRLENIN
101: QIVAIKQLDR NGLQGNREFL VEVLMLSLLH HPNLVNLIGY CADGDQRLLV YEFMSLGSLE DHLHDISPGK KRLDWNTRMK IAAGAARGLE YLHDKANPPV
201: IYRDLKCSNI LLGEGYHPKL SDFGLAKLGP VGENTHVSTR VMGTYGYCAP EYAMTGQLTL KSDVYSFGVV LLEIITGRKA IDNSKAAGEQ NLVAWARPLF
301: KDRRKFSQMA DPMLQGQYPP RGLFQALAVA AMCVQEQANM RPVIADVVTA LSYLASQKYD PNTQTLQSSR LAPGTPPRSK RGY

Best Arabidopsis Sequence Match ( AT5G02800.1 )
(BLAST)

001: MGWIPCSGKS SGRNKTRRNG DHKLDRKSSD CSVSTSEKSR AKSSLSESKS KGSDHIVAQT FTFSELATAT RNFRKECLIG EGGFGRVYKG YLASTSQTAA
101: IKQLDHNGLQ GNREFLVEVL MLSLLHHPNL VNLIGYCADG DQRLLVYEYM PLGSLEDHLH DISPGKQPLD WNTRMKIAAG AAKGLEYLHD KTMPPVIYRD
201: LKCSNILLDD DYFPKLSDFG LAKLGPVGDK SHVSTRVMGT YGYCAPEYAM TGQLTLKSDV YSFGVVLLEI ITGRKAIDSS RSTGEQNLVA WARPLFKDRR
301: KFSQMADPML QGQYPPRGLY QALAVAAMCV QEQPNLRPLI ADVVTALSYL ASQKFDPLAQ PVQGSLFAPG TPPRSKRV

Arabidopsis Description

PBL7Probable serine/threonine-protein kinase PBL7 [Source:UniProtKB/Swiss-Prot;Acc:Q0WRY5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.