Factsheet for PGSC0003DMT400045344

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400040141
PGSC0003DMT400040142
PGSC0003DMT400040143
PGSC0003DMT400040144
PGSC0003DMT400040206
PGSC0003DMT400040207
PGSC0003DMT400077934

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02800.1	PGSC0003DMT400040141	AT3G46090.1	17259181
AT5G02800.1	PGSC0003DMT400040142	AT3G46090.1	17259181
AT5G02800.1	PGSC0003DMT400040143	AT3G46090.1	17259181
AT5G02800.1	PGSC0003DMT400040144	AT3G46090.1	17259181
AT5G02800.1	PGSC0003DMT400040206	AT3G46090.1	17259181
AT5G02800.1	PGSC0003DMT400040207	AT3G46090.1	17259181
AT5G02800.1	PGSC0003DMT400077934	AT3G46090.1	17259181

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g085990.1.1	Tomato	plastid	99.73	99.73
PGSC0003DMT400071735	Potato	cytosol, mitochondrion, nucleus	82.75	78.72
KRH67618	Soybean	cytosol	78.71	77.04
KRG95902	Soybean	cytosol	78.17	76.32
KRH19781	Soybean	cytosol	78.71	76.24
KRH32375	Soybean	cytosol	78.44	75.98
GSMUA_Achr6P15480_001	Banana	cytosol	77.9	74.87
VIT_08s0040g03060.t01	Wine grape	nucleus	79.25	74.24
CDY55687	Canola	plastid	74.66	73.87
AT5G02800.1	Thale cress	plastid	75.2	73.81
Bra028862.1-P	Field mustard	plastid	74.66	73.67
CDY04867	Canola	plastid	74.39	73.4
GSMUA_Achr10P...	Banana	cytosol	76.55	73.39
GSMUA_AchrUn_...	Banana	plasma membrane	77.09	60.47
PGSC0003DMT400025866	Potato	cytosol	58.22	58.38
GSMUA_Achr10P...	Banana	cytosol	70.89	57.8
PGSC0003DMT400016900	Potato	cytosol	62.26	56.34
PGSC0003DMT400037295	Potato	cytosol	59.03	55.3
PGSC0003DMT400021929	Potato	cytosol	68.73	54.49
PGSC0003DMT400029366	Potato	cytosol, mitochondrion	55.8	53.35
PGSC0003DMT400002807	Potato	cytosol	57.41	52.21
PGSC0003DMT400065260	Potato	cytosol	64.42	51.62
PGSC0003DMT400036145	Potato	cytosol	54.18	51.02
PGSC0003DMT400051759	Potato	nucleus	59.3	50.23
PGSC0003DMT400045499	Potato	cytosol, plastid	59.3	49.77
PGSC0003DMT400052190	Potato	cytosol	54.72	45.21
PGSC0003DMT400060019	Potato	cytosol	50.4	37.33
PGSC0003DMT400031291	Potato	cytosol	52.83	35.0

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102590835	MapMan:18.4.1.37.1	MapMan:26.8.1.2.3	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1BHI4	PFAM:PF07714
EnsemblPlantsGene:PGSC0003DMG400017596	PGSC:PGSC0003DMG400017596	EnsemblPlants:PGSC0003DMT400045344	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF211	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002963506	RefSeq:XP_006363681.1	:

Description

Receptor serine-threonine protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400017596]

Coordinates

chr10:+:52240624..52247269

Molecular Weight (calculated)

41020.5 Da

IEP (calculated)

9.738

GRAVY (calculated)

-0.335

Length

371 amino acids

Sequence
(BLAST)

001: MGWFPCSGPS KQTSKKKNSV DSGRHSTDKL KSKNSLRSKE VDKDAGSNQI AAKTFIFRDL AAATKNFRGD FLLGEGGFGR VYKGVIESNQ VVAIKQLDRN
101: GLQGNREFLV EVLMLSLLHH PNLVNLIGYC ADGDQRLLVY EYMPLGSLED HLHDPTPGKE RLDWNTRMKI AAGAAKGLEY LHSASPPVIY RDLKCSNILL
201: GEGYHAKLSD FGLAKLGPVG DNTHVSTRVM GTYGYCAPEY AMTGQLTLKS DVYSFGVVLL EIITGRKAIE SSKTGGDFNL VIWARPLFKD RRKFSQMADP
301: MLQGHYPVRG MYQALAVAAM CVQEQPNMRP VIADVVTALT YLASQKFDHE TRGGIQTSRP GPATSPRMKR W

Best Arabidopsis Sequence Match ( AT5G02800.1 )
(BLAST)

001: MGWIPCSGKS SGRNKTRRNG DHKLDRKSSD CSVSTSEKSR AKSSLSESKS KGSDHIVAQT FTFSELATAT RNFRKECLIG EGGFGRVYKG YLASTSQTAA
101: IKQLDHNGLQ GNREFLVEVL MLSLLHHPNL VNLIGYCADG DQRLLVYEYM PLGSLEDHLH DISPGKQPLD WNTRMKIAAG AAKGLEYLHD KTMPPVIYRD
201: LKCSNILLDD DYFPKLSDFG LAKLGPVGDK SHVSTRVMGT YGYCAPEYAM TGQLTLKSDV YSFGVVLLEI ITGRKAIDSS RSTGEQNLVA WARPLFKDRR
301: KFSQMADPML QGQYPPRGLY QALAVAAMCV QEQPNLRPLI ADVVTALSYL ASQKFDPLAQ PVQGSLFAPG TPPRSKRV

Arabidopsis Description

PBL7Probable serine/threonine-protein kinase PBL7 [Source:UniProtKB/Swiss-Prot;Acc:Q0WRY5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.