Factsheet for PGSC0003DMT400016900

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g075550.2.1	Tomato	cytosol, nucleus	96.34	96.11
Bra000486.1-P	Field mustard	cytosol	53.66	64.33
CDX93611	Canola	cytosol	61.95	63.66
KRH24971	Soybean	cytosol	63.66	62.89
PGSC0003DMT400065260	Potato	cytosol	70.73	62.63
KRG88698	Soybean	cytosol	63.41	62.5
PGSC0003DMT400045344	Potato	plastid	56.34	62.26
Os07t0695300-01	Rice	cytosol, plastid	58.54	61.54
Bra018678.1-P	Field mustard	cytosol	62.44	61.24
CDY06282	Canola	cytosol	62.44	60.66
VIT_06s0004g03670.t01	Wine grape	cytosol, plastid	63.9	60.65
CDY32811	Canola	cytosol	61.95	60.33
Bra031596.1-P	Field mustard	cytosol	62.2	60.28
Bra030705.1-P	Field mustard	cytosol	61.22	60.19
CDX95117	Canola	cytosol	62.2	60.14
TraesCS2B01G096000.1	Wheat	cytosol, plastid	58.54	59.41
TraesCS2D01G079200.1	Wheat	plastid	58.54	59.26
TraesCS2A01G081400.1	Wheat	plastid	58.54	59.26
EER97804	Sorghum	cytosol	58.29	59.16
PGSC0003DMT400071735	Potato	cytosol, mitochondrion, nucleus	55.85	58.72
CDY22717	Canola	cytosol	62.2	57.69
AT2G28590.1	Thale cress	cytosol	58.29	56.37
CDX95766	Canola	cytosol	59.02	56.28
CDX83297	Canola	cytosol	59.02	56.15
KRH22964	Soybean	cytosol	61.71	53.26
PGSC0003DMT400025866	Potato	cytosol	47.8	52.97
KRH10353	Soybean	cytosol	61.71	52.16
PGSC0003DMT400037295	Potato	cytosol	50.24	52.02
HORVU2Hr1G013440.2	Barley	plastid	58.29	51.84
PGSC0003DMT400029366	Potato	cytosol, mitochondrion	48.29	51.03
PGSC0003DMT400036145	Potato	cytosol	46.59	48.48
PGSC0003DMT400002807	Potato	cytosol	47.8	48.04
PGSC0003DMT400021929	Potato	cytosol	53.9	47.22
AT1G07870.2	Thale cress	cytosol	61.95	47.21
PGSC0003DMT400045499	Potato	cytosol, plastid	50.24	46.61
PGSC0003DMT400051759	Potato	nucleus	48.54	45.43
CDY58830	Canola	nucleus	61.22	44.98
PGSC0003DMT400052190	Potato	cytosol	44.39	40.53
PGSC0003DMT400060019	Potato	cytosol	44.39	36.33
PGSC0003DMT400031291	Potato	cytosol	47.56	34.82

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102594996	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1A8B2	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400006610
PGSC:PGSC0003DMG400006610	EnsemblPlants:PGSC0003DMT400016900	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF499	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029515D1	RefSeq:XP_006367657.1	:	:	:

Description

Receptor serine-threonine protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400006610]

Coordinates

chr6:+:56133650..56137775

Molecular Weight (calculated)

45773.8 Da

IEP (calculated)

8.497

GRAVY (calculated)

-0.447

Length

410 amino acids

Sequence
(BLAST)

001: MGCFPCSGDG DTSVKKPEKK IFQTSSNHKY KRVEQPLPKQ VVTPVASQFK AVKNEEAKIA NRSTSKKDGG YSNIPQTDGK TGGAKAQRFK FDQLIAATED
101: FKEDYFLGEG GFGKVYKGHL VDTGEIVAIK QLDPNGCQGV REFVVEVQTL SKADHANLVK LIGCCAEGDQ RLLVYEYMSL GSLEDHLFDP WPNQKPLDWN
201: IRMKIAAGAA RGLEYLHDKM NPPIIYRDLK CSNILLGEEF HPKLSDFGLA KVGPSGDKTH VSTRVMGTYG YCAPDYAMTG QLTFKSDIYS FGVVLLEIIT
301: GRRAIDYTKS AAEQNLVSWA RPLFKDRKKF YKMADPALDG HYPIRSLYQA LAIAAMCVQE QPNMRPPIVD IVTALSYLAS LKYDPEIEPP IRKSYKSQSP
401: QKSINNEETW

Best Arabidopsis Sequence Match ( AT1G07870.2 )
(BLAST)

001: MGCFGCSKKS SKRSETNKDT VINRKIVGGT TSVAKSDKRD DQTQPSSDST KVSPYRDVNN EGGVGKEDQL SLDVKGLNLN DQVTGKKAQT FTFQELAEAT
101: GNFRSDCFLG EGGFGKVFKG TIEKLDQVVA IKQLDRNGVQ GIREFVVEVL TLSLADHPNL VKLIGFCAEG DQRLLVYEYM PQGSLEDHLH VLPSGKKPLD
201: WNTRMKIAAG AARGLEYLHD RMTPPVIYRD LKCSNILLGE DYQPKLSDFG LAKVGPSGDK THVSTRVMGT YGYCAPDYAM TGQLTFKSDI YSFGVVLLEL
301: ITGRKAIDNT KTRKDQNLVG WARPLFKDRR NFPKMVDPLL QGQYPVRGLY QALAISAMCV QEQPTMRPVV SDVVLALNFL ASSKYDPNSP SSSSGKNPSF
401: HRDRDDEEKR PHLVKETECE GRTGNTRRGI FPVSEYWIHA IPVIVFLCFF TLWIFSHSVS VMNDGEIMSI HRLEKSMAVR NESHVSLAIL ASSAVSPASS
501: ALVAVVSTNQ NLTTFHNATQ SQQNATQSVN KAKQPHAV

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HSH9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.