CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06282	Canola	cytosol	92.53	96.92
CDX93611	Canola	cytosol	79.19	87.72
CDX95117	Canola	cytosol	82.58	86.08
CDY32811	Canola	cytosol	81.67	85.75
KRH24971	Soybean	cytosol	66.74	71.08
KRG88698	Soybean	cytosol	65.61	69.71
CDX83297	Canola	cytosol	67.42	69.14
CDX95766	Canola	cytosol	66.97	68.84
AT1G07870.2	Thale cress	cytosol	83.71	68.77
CDY58830	Canola	nucleus	81.9	64.87
VIT_06s0004g03670.t01	Wine grape	cytosol, plastid	63.35	64.81
CDY57665	Canola	cytosol	41.4	63.76
CDY55687	Canola	plastid	52.94	62.4
Solyc06g075550.2.1	Tomato	cytosol, nucleus	57.92	62.29
CDY04867	Canola	plastid	52.94	62.23
PGSC0003DMT400016900	Potato	cytosol	57.69	62.2
Os07t0695300-01	Rice	cytosol, plastid	54.52	61.79
EER97804	Sorghum	cytosol	54.3	59.41
TraesCS2B01G096000.1	Wheat	cytosol, plastid	53.62	58.66
TraesCS2A01G081400.1	Wheat	plastid	53.62	58.52
TraesCS2D01G079200.1	Wheat	plastid	53.62	58.52
KRH22964	Soybean	cytosol	62.44	58.11
KRH10353	Soybean	cytosol	63.35	57.73
CDY19633	Canola	cytosol, mitochondrion	47.51	56.91
CDX82241	Canola	cytosol	47.74	56.72
CDY36035	Canola	cytosol	47.51	56.45
CDY29433	Canola	mitochondrion	47.06	56.06
PGSC0003DMT400065260	Potato	cytosol	57.24	54.64
CDX88927	Canola	cytosol	54.75	54.5
CDX96628	Canola	cytosol	45.93	53.85
CDY03295	Canola	cytosol	45.93	53.7
CDY33638	Canola	cytosol	45.93	53.7
CDY55594	Canola	plastid	43.89	53.3
CDY31493	Canola	cytosol	45.25	53.19
CDY39784	Canola	cytosol, plastid	45.48	53.17
CDY43074	Canola	mitochondrion	43.67	53.17
CDY29515	Canola	cytosol	45.48	52.76
Solyc11g072660.1.1	Tomato	cytosol	57.24	52.71
CDY65598	Canola	cytosol	46.15	52.31
CDX85669	Canola	cytosol	50.91	52.08
CDY24861	Canola	cytosol, plastid	45.7	52.06
CDX68101	Canola	cytosol	44.8	51.97
CDX85945	Canola	cytosol	44.8	51.97
CDX91145	Canola	cytosol	50.91	51.96
CDX88266	Canola	cytosol, nucleus, plastid	45.02	51.96
CDY25327	Canola	cytosol, plastid	45.93	51.65
CDY47164	Canola	cytosol, plastid	45.93	51.65
HORVU2Hr1G013440.2	Barley	plastid	53.85	51.63
CDX92596	Canola	plastid	54.98	51.37
CDX70830	Canola	cytosol	54.3	51.28
CDX78510	Canola	cytosol	51.36	51.24
CDX87608	Canola	cytosol	43.89	50.65
CDX69664	Canola	cytosol	52.04	50.55
CDX97232	Canola	cytosol	52.04	50.55
CDY13906	Canola	plastid	55.2	50.41
CDY47330	Canola	cytosol	42.53	49.34
CDY01117	Canola	cytosol	42.53	49.34
CDY07261	Canola	cytosol, plastid	28.05	48.25
CDY66752	Canola	cytosol	47.06	47.82
CDY05311	Canola	cytosol	47.29	47.39
CDY34917	Canola	cytosol	46.83	46.73
CDY08017	Canola	cytosol	46.61	46.61
CDX74065	Canola	cytosol	46.61	46.61
CDY53627	Canola	cytosol	51.13	45.94
CDY51533	Canola	cytosol	45.93	36.84
CDY28710	Canola	cytosol	45.48	36.35
CDX74234	Canola	cytosol	45.25	35.21
CDX92014	Canola	cytosol	45.02	34.97
CDX78694	Canola	cytosol	43.89	33.68
CDX70697	Canola	cytosol	43.44	32.82
CDY55581	Canola	cytosol	43.44	32.76
CDX69447	Canola	cytosol	43.21	32.21
CDY07262	Canola	cytosol	3.85	28.81
CDY24650	Canola	mitochondrion	47.06	17.43

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:A0A078GCD5	UniProt:A0A078GCD5	EnsemblPlants:CDY22717
ProteinID:CDY22717	ProteinID:CDY22717.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00019390001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF63	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE2CDF	SEG:seg	:	:	:

Description

BnaC08g43510DBnaC08g43510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GCD5]

Coordinates

chrLK032134:+:630777..633470

Molecular Weight (calculated)

49330.8 Da

IEP (calculated)

9.425

GRAVY (calculated)

-0.636

Length

442 amino acids

Sequence
(BLAST)

001: MGCFGRSEKP SKRSETNKGR NKDTLRNKNT IGCSSITNKR DDQTHPCSDS LKVSPYRDVN NGVGKAEDQL ALDAKRLNLN NQATGKKPQT FTFQELAAAT
101: GNFSSDCFLG EGGFGKVFKG KLEKLDQVVA IKQLDRNGPQ GIREFVVEVL TLSLADHPNL VKLIGFCAEG DQRLLVYEYM PLGSLEDHLH DLPPGQKPLD
201: WNTRMKIAAG AARGLEYLHD RMKPPVIYRD LKCSNILLGE DYQPKLSDFG LAKVGPSGDK THVSTRVMGT YGYCAPDYAM TGQLTFKSDI YSFGVVLLEL
301: ITGRKAIDTT KPRKDQNLVG WARPLFKDRR NFPKMVDPQL QGQYPGRGLY QALAISAMCV QEQPSMRPVV SDVVSALNFL ASSKYDPTSP SSSSSRRRNT
401: YRDDEEKRRD LSKETESEGN QIKFLASPRQ MVDTCMYKNT KQ

Best Arabidopsis Sequence Match ( AT2G28590.1 )
(BLAST)

001: MGCFGRTPKS NKRSDTKTTK NNDFTPKKLT VNANRDKLTQ PSSDCLKVSI CGDVSKEIVT KKDQLALDAK DTNVEDEVIV KKAQTFTFEE LSVSTGNFKS
101: DCFLGEGGFG KVYKGFIEKI NQVVAIKQLD RNGAQGIREF VVEVLTLSLA DHPNLVKLIG FCAEGVQRLL VYEYMPLGSL DNHLHDLPSG KNPLAWNTRM
201: KIAAGAARGL EYLHDTMKPP VIYRDLKCSN ILIDEGYHAK LSDFGLAKVG PRGSETHVST RVMGTYGYCA PDYALTGQLT FKSDVYSFGV VLLELITGRK
301: AYDNTRTRNH QSLVEWANPL FKDRKNFKKM VDPLLEGDYP VRGLYQALAI AAMCVQEQPS MRPVIADVVM ALDHLASSKY DRSHRQKQDN VTETKVDEEK
401: TLTTESNVCV EEKQEIKICS DQAT

Arabidopsis Description

PBL6Probable serine/threonine-protein kinase PBL6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIB6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.