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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY51533 Canola cytosol 94.76 95.1
AT3G02810.1 Thale cress cytosol 77.94 77.24
CDX74234 Canola cytosol 77.22 75.18
CDX92014 Canola cytosol 77.22 75.04
CDX78694 Canola cytosol 62.93 60.42
CDX70697 Canola cytosol 63.29 59.83
CDY55581 Canola cytosol 62.57 59.04
CDX69447 Canola cytosol 62.57 58.35
CDY57665 Canola cytosol 28.75 55.4
GSMUA_Achr5P29320_001 Banana cytosol 36.53 55.34
CDY65598 Canola cytosol 38.88 55.13
CDY03295 Canola cytosol 37.43 54.76
CDY39784 Canola cytosol, plastid 37.25 54.5
CDY04867 Canola plastid 36.53 53.72
CDY55687 Canola plastid 36.35 53.6
GSMUA_Achr5P14180_001 Banana cytosol, mitochondrion, plastid 33.27 53.33
GSMUA_Achr6P15570_001 Banana cytosol 36.71 53.14
GSMUA_Achr8P02730_001 Banana cytosol 34.72 51.47
CDY29433 Canola mitochondrion 34.36 51.21
CDY19633 Canola cytosol, mitochondrion 34.0 50.95
CDX82241 Canola cytosol 34.18 50.81
CDY36035 Canola cytosol 34.0 50.54
CDY66752 Canola cytosol 39.6 50.34
CDY01117 Canola cytosol 34.54 50.13
CDY47330 Canola cytosol 34.54 50.13
CDX93611 Canola cytosol 35.99 49.87
VIT_04s0043g01030.t01 Wine grape cytosol, plastid 41.59 49.78
CDY05311 Canola cytosol 39.6 49.66
GSMUA_Achr10P... Banana cytosol, plastid 38.16 49.53
CDY34917 Canola cytosol 39.42 49.21
CDX74065 Canola cytosol 39.24 49.09
CDY08017 Canola cytosol 39.24 49.09
CDX88927 Canola cytosol 39.24 48.87
CDX85669 Canola cytosol 38.16 48.84
CDX91145 Canola cytosol 38.16 48.73
CDX96628 Canola cytosol 32.73 48.01
CDY33638 Canola cytosol 32.73 47.88
CDY06282 Canola cytosol 36.35 47.63
CDY31493 Canola cytosol 32.37 47.61
CDY29515 Canola cytosol 32.73 47.51
CDY55594 Canola plastid 31.1 47.25
TraesCS3D01G543300.1 Wheat cytosol 34.0 47.24
CDX95117 Canola cytosol 36.17 47.17
CDY43074 Canola mitochondrion 30.92 47.11
CDX97232 Canola cytosol 38.7 47.03
CDX69664 Canola cytosol 38.7 47.03
CDY32811 Canola cytosol 35.62 46.79
GSMUA_Achr4P18960_001 Banana plasma membrane, plastid 36.35 46.42
TraesCS3A01G537900.1 Wheat cytosol 34.36 46.34
CDX78510 Canola cytosol 37.07 46.28
HORVU3Hr1G117850.1 Barley cytosol 33.45 46.25
CDX70830 Canola cytosol 39.06 46.15
TraesCS3B01G603300.1 Wheat cytosol, plastid 34.18 45.99
EES17638 Sorghum peroxisome, plastid 37.07 45.86
CDY22717 Canola cytosol 36.35 45.48
CDY24861 Canola cytosol, plastid 31.83 45.36
CDY47164 Canola cytosol, plastid 32.19 45.29
CDY25327 Canola cytosol, plastid 32.19 45.29
CDX92596 Canola plastid 38.7 45.24
Os05t0125400-00 Rice cytosol 35.99 45.23
CDX85945 Canola cytosol 30.92 44.88
CDY13906 Canola plastid 39.06 44.63
CDX68101 Canola cytosol 30.74 44.62
HORVU1Hr1G013840.1 Barley mitochondrion 35.62 44.27
TraesCS1B01G085000.1 Wheat plastid 35.26 43.62
TraesCS1D01G067700.1 Wheat plastid 35.26 43.53
KRG97093 Soybean cytosol 46.65 43.43
CDX88266 Canola cytosol, nucleus, plastid 30.02 43.34
KRH68843 Soybean cytosol 45.39 43.28
CDX87608 Canola cytosol 29.84 43.08
TraesCS1A01G066700.1 Wheat peroxisome, plastid 34.9 43.08
CDY53627 Canola cytosol 37.61 42.28
CDX95766 Canola cytosol 32.73 42.09
CDX83297 Canola cytosol 32.73 42.0
Solyc05g055860.2.1 Tomato cytosol 36.35 41.36
Zm00001d041938_P001 Maize plastid 35.62 41.3
PGSC0003DMT400060019 Potato cytosol 37.07 40.92
Solyc04g050970.2.1 Tomato plastid 40.69 40.11
CDY07261 Canola cytosol, plastid 18.63 40.08
PGSC0003DMT400031291 Potato cytosol 39.96 39.46
KRG92591 Soybean cytosol 42.5 37.96
KRH34195 Soybean cytosol 41.59 36.57
CDY58830 Canola nucleus 35.8 35.48
CDY07262 Canola cytosol 3.44 32.2
CDY24650 Canola mitochondrion 39.78 18.44
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.37.1Gene3D:3.30.200.20GO:A0A078GQ89UniProt:A0A078GQ89EnsemblPlants:CDY28710
ProteinID:CDY28710ProteinID:CDY28710.1ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00041347001
InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069PIRSF:PIRSF000654ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF48InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EEFDF1SEG:seg::
Description
BnaCnng05960DBnaCnng05960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQ89]
Coordinates
chrLK032225:-:319712..321806
Molecular Weight (calculated)
61948.6 Da
IEP (calculated)
4.610
GRAVY (calculated)
-0.763
Length
553 amino acids
Sequence
(BLAST)
001: MHCFPCFSTP KSKKSPTRNE TNDNETRPHA HENKHADEAE QLEETTLKTF TFRELATATK NFRQECLLGE GGFGRVYKGT LQPTGRVVAV KQLDKHGLHG
101: NKEFQAEVLS LGRLDHPNLV KLVGYCADGD QRLLVYDYVT GGSLQNHLHE PKSDREPMDW TTRMQIAYGA AQGLDYLHDK VNPPVIYRDL KASNVLLDDD
201: LCPKLSDFGL HKLGPGTGDK MVALTSRVMG TYGYSAPEYT RGGNLTLKSD VYSFGVVLLE LITGRRALDT TRPNDEQNLV SWAQPLFGDP KRYPDMADPV
301: LENKFSERGL NQAVAIASMC VQEEATTRPL ISDVMVALSF LSMSKEDGVP TTVPILSFRD KSMSIALSRH DSDLASSKLA VEDEKSSTSS DKESSVDSMK
401: ERVIKREEED SLSESDDGSG SNSDEEQEED RNSLSTEPID EKNQAQSLKI NYRYSWEEVD VSDEKLSSKG SQKSNDESIY SCYDIEVDHD DLPRNEKHIH
501: LEHIHSSKSE DDQSVYFDDE PGDDNEISFH RIKSEVDVDY VEDDSGTSLH PVK
Best Arabidopsis Sequence Match ( AT3G02810.1 )
(BLAST)
001: MHCFPCFSSP KNKKSSTTNE TNDNNEPKPD DRRRAEETEE IEQSEGTSLK IFTFRELATA TKNFRQECLL GEGGFGRVYK GTLKSTGQVV AVKQLDKHGL
101: HGNKEFQAEV LSLGQLDHPN LVKLIGYCAD GDQRLLVYDY ISGGSLQDHL HEPKADSDPM DWTTRMQIAY AAAQGLDYLH DKANPPVIYR DLKASNILLD
201: DDFSPKLSDF GLHKLGPGTG DKMMALSSRV MGTYGYSAPE YTRGGNLTLK SDVYSFGVVL LELITGRRAL DTTRPNDEQN LVSWAQPIFR DPKRYPDMAD
301: PVLENKFSER GLNQAVAIAS MCVQEEASAR PLISDVMVAL SFLSMPTEDG IPTTVPILSF KDKSMSIALS RHDSNLVSPP PELATEDDKS STSSGEESSL
401: ESEKESVSKN EYKKKHEEED SSMESDDESD SNSEHEKDQP PKPIDEKNQA QSLKIKYRYS WEDIDVNDER LSSKSSQKSN DESTSSRYDS DRDQDEKGKE
501: EEEEEEAEEK HTHIEHIDSS KTDDDQSVYF DNDDDSGDDN GGSLHRIKSD VAIDSIKE
Arabidopsis Description
LIP2Receptor-like kinase LIP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8S2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.