Factsheet for Zm00001d041938_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G543300.1	Wheat	cytosol	56.81	68.09
HORVU3Hr1G117850.1	Barley	cytosol	56.81	67.75
TraesCS3B01G603300.1	Wheat	cytosol, plastid	57.44	66.67
TraesCS3A01G537900.1	Wheat	cytosol	57.23	66.59
GSMUA_Achr5P29320_001	Banana	cytosol	44.23	57.81
AT3G24790.2	Thale cress	plastid	43.82	54.86
GSMUA_Achr8P02730_001	Banana	cytosol	42.56	54.42
CDY03295	Canola	cytosol	42.98	54.23
CDY39784	Canola	cytosol, plastid	42.77	53.97
Bra036670.1-P	Field mustard	cytosol	42.56	53.7
GSMUA_Achr5P14180_001	Banana	cytosol, mitochondrion, plastid	38.36	53.04
GSMUA_Achr6P15570_001	Banana	cytosol	42.35	52.88
CDY65598	Canola	cytosol	42.98	52.56
CDY47330	Canola	cytosol	40.67	50.92
CDY01117	Canola	cytosol	40.67	50.92
Bra032694.1-P	Field mustard	cytosol	40.67	50.52
GSMUA_Achr10P...	Banana	cytosol, plastid	44.86	50.23
AT4G13190.1	Thale cress	cytosol	40.88	50.13
AT3G07070.1	Thale cress	cytosol	43.4	50.0
GSMUA_Achr4P18960_001	Banana	plasma membrane, plastid	44.86	49.42
KRH46760	Soybean	cytosol	45.07	49.2
VIT_07s0005g06450.t01	Wine grape	plastid	42.56	47.54
PGSC0003DMT400051759	Potato	nucleus	43.61	47.49
Solyc06g083500.2.1	Tomato	nucleus	43.4	47.48
PGSC0003DMT400045499	Potato	cytosol, plastid	43.82	47.29
CDY66752	Canola	cytosol	42.98	47.13
CDY05311	Canola	cytosol	43.19	46.71
Solyc09g061330.1.1	Tomato	plastid	43.61	46.64
Bra001233.1-P	Field mustard	cytosol	43.19	46.61
CDX74065	Canola	cytosol	42.98	46.38
CDY08017	Canola	cytosol	42.98	46.38
Bra040358.1-P	Field mustard	cytosol	42.77	46.05
CDY34917	Canola	cytosol	42.77	46.05
Zm00001d027508_P002	Maize	cytosol	35.43	44.95
Zm00001d048341_P001	Maize	cytosol	35.22	44.92
KRG99800	Soybean	cytosol	45.07	44.7
VIT_04s0043g01030.t01	Wine grape	cytosol, plastid	42.56	43.94
Zm00001d022492_P002	Maize	plastid	42.35	43.63
Zm00001d043227_P002	Maize	mitochondrion	39.83	43.48
Zm00001d010492_P010	Maize	cytosol	42.98	43.25
Zm00001d003925_P001	Maize	cytosol, nucleus, plastid	42.98	42.18
Zm00001d028701_P001	Maize	cytosol	34.59	41.56
Zm00001d038394_P002	Maize	cytosol	36.9	41.31
Zm00001d040303_P001	Maize	plasma membrane	40.04	41.25
Zm00001d011908_P001	Maize	cytosol, nucleus, plastid	42.77	41.05
Zm00001d042185_P003	Maize	cytosol	42.98	40.92
Zm00001d016591_P002	Maize	cytosol	43.61	40.86
Zm00001d012600_P001	Maize	plastid	41.3	40.79
Zm00001d050575_P001	Maize	cytosol	43.61	40.15
Zm00001d016176_P001	Maize	cytosol	32.7	39.39
Zm00001d010687_P004	Maize	mitochondrion, plastid	41.51	39.13
Solyc05g055860.2.1	Tomato	cytosol	38.78	38.07
Zm00001d010548_P001	Maize	mitochondrion	36.9	38.01
PGSC0003DMT400060019	Potato	cytosol	38.99	37.13
CDY51533	Canola	cytosol	41.72	36.12
Bra040602.1-P	Field mustard	cytosol	41.72	35.99
PGSC0003DMT400031291	Potato	cytosol	42.14	35.89
CDY28710	Canola	cytosol	41.3	35.62
Solyc04g050970.2.1	Tomato	plastid	41.72	35.47
AT3G02810.1	Thale cress	cytosol	41.3	35.3
KRH68843	Soybean	cytosol	42.35	34.83
Bra001065.1-P	Field mustard	cytosol	40.25	33.8
CDX74234	Canola	cytosol	40.25	33.8
CDX92014	Canola	cytosol	40.04	33.57
KRG97093	Soybean	cytosol	41.3	33.16
Zm00001d019727_P001	Maize	plastid	40.04	32.32
Bra006358.1-P	Field mustard	cytosol	38.99	32.29
CDX78694	Canola	cytosol	38.99	32.29
CDX70697	Canola	cytosol	38.99	31.79
Bra008617.1-P	Field mustard	cytosol	39.41	31.76
CDY55581	Canola	cytosol	38.99	31.74
CDX69447	Canola	cytosol	39.41	31.7
KRG92591	Soybean	cytosol	39.41	30.37
AT5G16500.1	Thale cress	cytosol	39.83	29.87
KRH34195	Soybean	cytosol	38.57	29.25
Bra029618.1-P	Field mustard	mitochondrion	46.75	18.71
CDY24650	Canola	mitochondrion	46.75	18.69

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	UniProt:A0A1D6MZX4	InterPro:Dabb	InterPro:Dimeric_a/b-barrel
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR013097
InterPro:Kinase-like_dom_sf	ProteinID:ONM34121.1	PFAM:PF00069	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS51502	PANTHER:PTHR27001	PANTHER:PTHR27001:SF48	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF54909	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0008423A8F	EnsemblPlantsGene:Zm00001d041938
EnsemblPlants:Zm00001d041938_P001	EnsemblPlants:Zm00001d041938_T001	SEG:seg	:	:	:

Description

Receptor-like kinase LIP2

Coordinates

chr3:-:144476750..144493274

Molecular Weight (calculated)

51346.2 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.119

Length

477 amino acids

Sequence
(BLAST)

001: MASHHLTSPT HLLHTRHATR ESLASYAAHP THVAAVQGHV LPNALDITAV NWVNAVPLTS PTTLGSFVRL TLAKAKEGVE VGQLVEKLAV ATQTVGDAEI
101: MVGCFACFKP AGDQEADEEA PLPSTSRRRG RSLRLPSCSS SNKGNQQADN PIAAASSSNV DSRARAFTYD ELAAATENFR AECLLGEGGF GRVYRGRLES
201: GQVVAVKQLD REGVQGNREF VVEVLMLSLL HHPNLVNLVG YCADGEQRLL VYEYMALGSL ADHLLLDTSS RDKGNAAPEQ EQRALSWETR MRVALGAARG
301: LEYLHETANP PVIYRDLKSS NVLLDDALCP KLSDFGLAKL GPIGDRSPRV MGTYGYCAPE YVRAGTITVK ADVYSFGVLL LELITGRRAV DSTRPTAEQL
401: LVAWAMPMLR DSKRYRELAD PLLRGGFPER DLKQAVAVAA MCLQEEASAR PLMSDAAMTL AYLAEAAASA AASSSTS

Best Arabidopsis Sequence Match ( AT3G07070.1 )
(BLAST)

001: MNCFSCFYFH EKKKVPRDSD NSYRRNGEVT GRDNNKTHPE NPKTVNEQNK NNDEDKEVTN NIAAQTFSFR ELATATKNFR QECLIGEGGF GRVYKGKLEK
101: TGMIVAVKQL DRNGLQGNKE FIVEVLMLSL LHHKHLVNLI GYCADGDQRL LVYEYMSRGS LEDHLLDLTP DQIPLDWDTR IRIALGAAMG LEYLHDKANP
201: PVIYRDLKAA NILLDGEFNA KLSDFGLAKL GPVGDKQHVS SRVMGTYGYC APEYQRTGQL TTKSDVYSFG VVLLELITGR RVIDTTRPKD EQNLVTWAQP
301: VFKEPSRFPE LADPSLEGVF PEKALNQAVA VAAMCLQEEA TVRPLMSDVV TALGFLGTAP DGSISVPHYD DPPQPSDETS VEDSVAAEER ERAVAEAMEW
401: GVASRAHSRN PSAS

Arabidopsis Description

PBL26Probable serine/threonine-protein kinase PBL26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.