Factsheet for Zm00001d038394_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19660	Sorghum	cytosol	92.02	91.59
Zm00001d010548_P001	Maize	mitochondrion	93.9	86.39
Os05t0463000-01	Rice	cytosol, mitochondrion, plastid	74.41	76.02
TraesCS1B01G297300.1	Wheat	cytosol	72.54	72.71
TraesCS1D01G286800.1	Wheat	cytosol	72.54	71.03
HORVU1Hr1G071750.3	Barley	cytosol	66.9	66.28
TraesCS1A01G287900.1	Wheat	cytosol	72.07	65.88
VIT_10s0116g00850.t01	Wine grape	cytosol	42.25	49.59
Solyc10g005300.2.1	Tomato	cytosol, mitochondrion	42.02	46.02
PGSC0003DMT400029366	Potato	cytosol, mitochondrion	41.78	45.88
Bra021308.1-P	Field mustard	cytosol, plastid	39.91	43.81
CDY24861	Canola	cytosol, plastid	39.67	43.56
AT1G61860.1	Thale cress	cytosol	39.67	43.44
CDY47164	Canola	cytosol, plastid	39.91	43.26
CDY25327	Canola	cytosol, plastid	39.91	43.26
Bra028381.1-P	Field mustard	cytosol, nucleus, plastid	37.09	42.47
Zm00001d048341_P001	Maize	cytosol	36.85	41.98
Zm00001d027508_P002	Maize	cytosol	36.85	41.76
Zm00001d022492_P002	Maize	plastid	45.31	41.68
KRH11410	Soybean	plastid	37.09	40.51
CDY07261	Canola	cytosol, plastid	24.41	40.47
Zm00001d010492_P010	Maize	cytosol	44.13	39.66
Zm00001d003925_P001	Maize	cytosol, nucleus, plastid	44.6	39.09
Zm00001d043227_P002	Maize	mitochondrion	39.44	38.44
Zm00001d016176_P001	Maize	cytosol	35.68	38.38
KRH20875	Soybean	cytosol, plastid	38.03	38.12
Zm00001d016591_P002	Maize	cytosol	45.54	38.11
Zm00001d050575_P001	Maize	cytosol	46.24	38.03
Zm00001d042185_P003	Maize	cytosol	44.6	37.92
Zm00001d011908_P001	Maize	cytosol, nucleus, plastid	44.13	37.83
Zm00001d041938_P001	Maize	plastid	41.31	36.9
Zm00001d040303_P001	Maize	plasma membrane	39.67	36.5
Zm00001d012600_P001	Maize	plastid	39.67	34.99
Zm00001d028701_P001	Maize	cytosol	31.69	34.01
Zm00001d010687_P004	Maize	mitochondrion, plastid	40.38	33.99
CDY07262	Canola	cytosol	4.23	30.51
Zm00001d019727_P001	Maize	plastid	38.03	27.41

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	ProteinID:AQK86536.1	ProteinID:AQK86537.1	EMBL:BT062751
UniProt:C0P382	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF209	InterPro:Prot_kinase_dom	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI0001949077	EnsemblPlantsGene:Zm00001d038394	EnsemblPlants:Zm00001d038394_P002	EnsemblPlants:Zm00001d038394_T002	SEG:seg

Description

Receptor-like kinase LIP2

Coordinates

chr6:-:156292425..156294916

Molecular Weight (calculated)

45478.4 Da

IEP (calculated)

4.420

GRAVY (calculated)

-0.359

Length

426 amino acids

Sequence
(BLAST)

001: MSCFPCFGGG KGNNDDADAE SPGDAAPASN MTPPAMVQAP AAYFPAPAAA PTAAAPPKPG GGNQAHEASA DDSALRLAIT GQAFAFRELA AATDHFTPYN
101: LVGEGGFFRV YKGRLEKSGQ TVAIKQLDKH GFQDNKAFLT GVAKLSQLHH ENLVDIIGYC ADGDQRLLVY ESVPAGTLED HLFDLPADKK PMDWCTRMKV
201: AHGAAQGLEY LHETANPPVV YGEFKASHIL LDEKLTPKLS DFGLAQLGQA GGSMPVVASP MMGSFGCCAP EYDRTGQATM KSDAYSFGVV LVQLISGRRA
301: VDTSKPVDEQ NVVTWAMPMF KDQKRYHELV DPLIKKEYPA KALNQVVAMA AMCLQEEDSV RPLMADVVMT LGFLTAMPPD PPAPAAPPPA AAPEPKEDKE
401: SDHSDSSSSS SSDDDEDNEE EETEEQ

Best Arabidopsis Sequence Match ( AT3G07070.1 )
(BLAST)

001: MNCFSCFYFH EKKKVPRDSD NSYRRNGEVT GRDNNKTHPE NPKTVNEQNK NNDEDKEVTN NIAAQTFSFR ELATATKNFR QECLIGEGGF GRVYKGKLEK
101: TGMIVAVKQL DRNGLQGNKE FIVEVLMLSL LHHKHLVNLI GYCADGDQRL LVYEYMSRGS LEDHLLDLTP DQIPLDWDTR IRIALGAAMG LEYLHDKANP
201: PVIYRDLKAA NILLDGEFNA KLSDFGLAKL GPVGDKQHVS SRVMGTYGYC APEYQRTGQL TTKSDVYSFG VVLLELITGR RVIDTTRPKD EQNLVTWAQP
301: VFKEPSRFPE LADPSLEGVF PEKALNQAVA VAAMCLQEEA TVRPLMSDVV TALGFLGTAP DGSISVPHYD DPPQPSDETS VEDSVAAEER ERAVAEAMEW
401: GVASRAHSRN PSAS

Arabidopsis Description

PBL26Probable serine/threonine-protein kinase PBL26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.