CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47164	Canola	cytosol, plastid	99.49	99.49
Bra028381.1-P	Field mustard	cytosol, nucleus, plastid	93.89	99.19
CDY24861	Canola	cytosol, plastid	96.44	97.68
CDY07261	Canola	cytosol, plastid	61.58	94.16
AT1G61860.1	Thale cress	cytosol	90.59	91.52
CDY07262	Canola	cytosol	11.7	77.97
CDY57665	Canola	cytosol	47.07	64.46
VIT_10s0116g00850.t01	Wine grape	cytosol	56.74	61.43
CDY36035	Canola	cytosol	55.98	59.14
CDX82241	Canola	cytosol	55.73	58.87
PGSC0003DMT400029366	Potato	cytosol, mitochondrion	57.25	57.99
CDY19633	Canola	cytosol, mitochondrion	54.2	57.72
CDY29433	Canola	mitochondrion	54.45	57.68
Solyc10g005300.2.1	Tomato	cytosol, mitochondrion	56.74	57.33
CDY43074	Canola	mitochondrion	50.89	55.1
CDY55594	Canola	plastid	50.89	54.95
CDY55687	Canola	plastid	52.42	54.93
CDY04867	Canola	plastid	52.16	54.52
KRH11410	Soybean	plastid	51.91	52.31
CDY03295	Canola	cytosol	50.13	52.12
CDY39784	Canola	cytosol, plastid	49.87	51.85
CDY65598	Canola	cytosol	51.15	51.54
CDX93611	Canola	cytosol	52.16	51.38
CDX96628	Canola	cytosol	48.85	50.93
CDY33638	Canola	cytosol	48.85	50.79
CDX91145	Canola	cytosol	55.73	50.58
CDX85669	Canola	cytosol	55.47	50.46
CDY31493	Canola	cytosol	48.09	50.27
CDX88927	Canola	cytosol	56.74	50.23
CDY29515	Canola	cytosol	48.6	50.13
CDY47330	Canola	cytosol	48.35	49.87
CDY01117	Canola	cytosol	48.35	49.87
CDY06282	Canola	cytosol	52.42	48.82
CDX78510	Canola	cytosol	54.71	48.53
CDX95117	Canola	cytosol	52.16	48.35
CDX68101	Canola	cytosol	46.82	48.29
CDX69664	Canola	cytosol	55.73	48.13
CDX97232	Canola	cytosol	55.73	48.13
CDX85945	Canola	cytosol	46.56	48.03
KRH20875	Soybean	cytosol, plastid	51.91	48.0
CDY32811	Canola	cytosol	51.4	47.98
CDX88266	Canola	cytosol, nucleus, plastid	46.31	47.52
CDX87608	Canola	cytosol	45.8	47.0
CDX70830	Canola	cytosol	55.73	46.79
CDX92596	Canola	plastid	55.98	46.51
CDY66752	Canola	cytosol	51.15	46.21
CDY05311	Canola	cytosol	51.65	46.03
CDY22717	Canola	cytosol	51.65	45.93
CDX74065	Canola	cytosol	51.4	45.7
CDY08017	Canola	cytosol	51.4	45.7
CDY13906	Canola	plastid	55.98	45.45
CDY34917	Canola	cytosol	50.89	45.15
CDY53627	Canola	cytosol	55.47	44.31
CDX83297	Canola	cytosol	48.35	44.08
CDX95766	Canola	cytosol	48.09	43.95
Os05t0463000-01	Rice	cytosol, mitochondrion, plastid	45.04	42.45
EES19660	Sorghum	cytosol	44.78	41.12
TraesCS1B01G297300.1	Wheat	cytosol	43.77	40.47
Zm00001d038394_P002	Maize	cytosol	43.26	39.91
TraesCS1D01G286800.1	Wheat	cytosol	43.26	39.08
HORVU1Hr1G071750.3	Barley	cytosol	41.98	38.37
TraesCS1A01G287900.1	Wheat	cytosol	43.77	36.91
Zm00001d010548_P001	Maize	mitochondrion	43.26	36.72
CDY58830	Canola	nucleus	51.4	36.2
CDY51533	Canola	cytosol	46.06	32.85
CDY28710	Canola	cytosol	45.29	32.19
CDX74234	Canola	cytosol	45.29	31.34
CDX92014	Canola	cytosol	45.04	31.11
CDX78694	Canola	cytosol	44.53	30.38
CDX70697	Canola	cytosol	45.04	30.26
CDX69447	Canola	cytosol	44.02	29.17
CDY55581	Canola	cytosol	43.26	29.01
CDY24650	Canola	mitochondrion	51.65	17.02

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:A0A078GJG6	UniProt:A0A078GJG6	EnsemblPlants:CDY25327
ProteinID:CDY25327	ProteinID:CDY25327.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00029427001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF127	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EDBD5F	SEG:seg	:	:

Description

BnaC01g29960DBnaC01g29960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJG6]

Coordinates

chrLK032173:-:396183..398089

Molecular Weight (calculated)

43767.2 Da

IEP (calculated)

5.951

GRAVY (calculated)

-0.305

Length

393 amino acids

Sequence
(BLAST)

001: MMKLCPCFSN PQQLGANSPR DSFDEGLTGY RGHSSKLFAL FTFRSRGKGS SRQKYITDEI KKYGNVKSSG KIFKFKELIA ATDNFSMECM IGEGGFGRVY
101: KGFLTSLNQV VAVKRLDRNG LQGTREFFAE VMVLSLAQHQ NLVNLIGYCV EDDQRVLVYE FMPNGSLEDH LFDLPEGAPS LDWFTRMKIV HGAAKGLEYL
201: HDYADPPVIY RDFKASNILL QSDFNSKLSD FGLARLGPTE GKDHVSTRVM GTYGYCAPEY AMTGQLTAKS DVYSFGVVLL EVISGRRTID GDRPTEEQNL
301: ISWAEPLLKD RRMFTRIVDP NLKGNYPLKG LHQALAIATM CLQEEAETRP FMGDVVTALE FLAKPIEVVD DTNNTDTTTP APVSDAQKSA SDS

Best Arabidopsis Sequence Match ( AT1G61860.1 )
(BLAST)

001: MMKLCPCFIN PHQLGPNSPR DSFDEGLTAY RGHSRKLFAL FTFRSHRKGS CRQKYITEEI KKYGNVKNCG RIFKFKELIA ATDNFSMDCM IGEGGFGRVY
101: KGFLTSLNQV VAVKRLDRNG LQGTREFFAE VMVLSLAQHP NLVNLIGYCV EDEQRVLVYE FMPNGSLEDH LFDLPEGSPS LDWFTRMRIV HGAAKGLEYL
201: HDYADPPVIY RDFKASNILL QSDFNSKLSD FGLARLGPTE GKDHVSTRVM GTYGYCAPEY AMTGQLTAKS DVYSFGVVLL EIISGRRAID GDRPTEEQNL
301: ISWAEPLLKD RRMFAQIVDP NLDGNYPVKG LHQALAIAAM CLQEEAETRP LMGDVVTALE FLAKPIEVVD NTNTTPASPT QTSSSDSSN

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HX16]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.