CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029618.1-P	Field mustard	mitochondrion	99.5	99.58
CDY05311	Canola	cytosol	36.71	99.32
AT3G07070.1	Thale cress	cytosol	32.61	93.96
CDY65598	Canola	cytosol	30.34	92.82
CDY34917	Canola	cytosol	34.12	91.87
CDY08017	Canola	cytosol	33.95	91.63
CDX74065	Canola	cytosol	33.95	91.63
CDY66752	Canola	cytosol	33.11	90.8
CDY39784	Canola	cytosol, plastid	21.79	68.78
CDY03295	Canola	cytosol	21.71	68.52
GSMUA_Achr5P29320_001	Banana	cytosol	20.7	67.67
CDY57665	Canola	cytosol	16.09	66.9
KRH46760	Soybean	cytosol	23.55	64.3
VIT_07s0005g06450.t01	Wine grape	plastid	22.46	62.76
GSMUA_Achr6P15570_001	Banana	cytosol	20.03	62.57
GSMUA_Achr8P02730_001	Banana	cytosol	19.28	61.66
CDY01117	Canola	cytosol	19.61	61.42
CDY47330	Canola	cytosol	19.53	61.15
GSMUA_Achr10P...	Banana	cytosol, plastid	21.79	61.03
GSMUA_Achr5P14180_001	Banana	cytosol, mitochondrion, plastid	17.6	60.87
KRG99800	Soybean	cytosol	24.14	59.88
CDY04867	Canola	plastid	18.61	59.04
CDY55687	Canola	plastid	18.52	58.93
CDX82241	Canola	cytosol	18.36	58.87
PGSC0003DMT400051759	Potato	nucleus	21.54	58.68
CDY36035	Canola	cytosol	18.27	58.6
Solyc06g083500.2.1	Tomato	nucleus	21.29	58.26
Solyc09g061330.1.1	Tomato	plastid	21.71	58.07
PGSC0003DMT400045499	Potato	cytosol, plastid	21.46	57.92
CDY19633	Canola	cytosol, mitochondrion	17.85	57.72
CDY29433	Canola	mitochondrion	17.85	57.41
CDX88927	Canola	cytosol	21.21	56.98
CDY55594	Canola	plastid	17.1	56.04
CDY43074	Canola	mitochondrion	17.02	55.92
GSMUA_Achr4P18960_001	Banana	plasma membrane, plastid	20.29	55.89
CDX85669	Canola	cytosol	19.78	54.63
CDX91145	Canola	cytosol	19.78	54.5
EES17638	Sorghum	peroxisome, plastid	20.37	54.36
CDX70830	Canola	cytosol	21.04	53.63
CDY31493	Canola	cytosol	16.85	53.46
Os05t0125400-00	Rice	cytosol	19.7	53.41
CDX96628	Canola	cytosol	16.76	53.05
CDY29515	Canola	cytosol	16.93	53.02
CDY33638	Canola	cytosol	16.76	52.91
TraesCS1D01G067700.1	Wheat	plastid	19.87	52.9
CDX92596	Canola	plastid	20.96	52.85
HORVU1Hr1G013840.1	Barley	mitochondrion	19.7	52.81
TraesCS1B01G085000.1	Wheat	plastid	19.7	52.57
TraesCS3D01G543300.1	Wheat	cytosol	17.52	52.51
CDX93611	Canola	cytosol	17.52	52.38
TraesCS1A01G066700.1	Wheat	peroxisome, plastid	19.61	52.23
CDY13906	Canola	plastid	21.12	52.07
CDY24861	Canola	cytosol, plastid	16.85	51.8
CDY47164	Canola	cytosol, plastid	17.02	51.65
CDY25327	Canola	cytosol, plastid	17.02	51.65
CDX78510	Canola	cytosol	19.11	51.47
CDX88266	Canola	cytosol, nucleus, plastid	16.51	51.44
CDX85945	Canola	cytosol	16.35	51.18
CDX87608	Canola	cytosol	16.43	51.17
TraesCS3A01G537900.1	Wheat	cytosol	17.52	50.98
CDX68101	Canola	cytosol	16.26	50.92
TraesCS3B01G603300.1	Wheat	cytosol, plastid	17.52	50.85
CDX97232	Canola	cytosol	19.36	50.77
CDX69664	Canola	cytosol	19.36	50.77
HORVU3Hr1G117850.1	Barley	cytosol	16.93	50.5
CDY06282	Canola	cytosol	17.52	49.53
CDX95117	Canola	cytosol	17.43	49.06
CDY07261	Canola	cytosol, plastid	10.48	48.64
CDY32811	Canola	cytosol	17.1	48.46
CDY22717	Canola	cytosol	17.43	47.06
CDY53627	Canola	cytosol	19.36	46.95
Zm00001d041938_P001	Maize	plastid	18.69	46.75
CDX95766	Canola	cytosol	16.35	45.35
CDX83297	Canola	cytosol	16.18	44.78
CDY51533	Canola	cytosol	18.86	40.83
CDY28710	Canola	cytosol	18.44	39.78
CDX74234	Canola	cytosol	18.36	38.56
CDX92014	Canola	cytosol	18.27	38.31
CDX78694	Canola	cytosol	18.02	37.33
CDY58830	Canola	nucleus	17.43	37.28
CDX70697	Canola	cytosol	18.02	36.75
CDY55581	Canola	cytosol	17.6	35.84
CDX69447	Canola	cytosol	17.77	35.75
CDY07262	Canola	cytosol	1.59	32.2

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:2.120.10.30	Gene3D:3.30.200.20	InterPro:6-blade_b-propeller_TolB-like	GO:A0A078GDQ8
UniProt:A0A078GDQ8	EnsemblPlants:CDY24650	ProteinID:CDY24650	ProteinID:CDY24650.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00027027001	InterPro:IPR000719	InterPro:IPR011042	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24104	PANTHER:PTHR24104:SF10	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	SUPFAM:SSF63825	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EF0312	SEG:seg

Description

BnaA05g30490DBnaA05g30490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDQ8]

Coordinates

chrLK032162:-:130457..136803

Molecular Weight (calculated)

133756.0 Da

IEP (calculated)

6.017

GRAVY (calculated)

-0.387

Length

1193 amino acids

Sequence
(BLAST)

0001: MSSSRSLNLK KISWLSSRIV SGCRRPVAIG GDRDIVSNTL VGTRGFASVK RVSRASSSPH ADLLSYVRAS LDKLEGPSHH WLNRDFETKQ LFKDKGTYLV
0101: LVGDLLNGDP SGFFEKLKLL QQRSPGVCFM GIHFSDQARI TDDRAALAEL IVKEYLTFPV LLSQKDFPKS SGEEVRYFVF RDFKNPLIYQ DKDLDIASVA
0201: KALDSLSQDT EKSKSVKLFT NTWSKQADAI KEPHFSSFLQ DLFFYFPGCI SADEVGDCLF LSDSNHHRVI ISNSNGEILD SIGCFPGFED GEFESAKMLR
0301: PAATLYDEEE DCLYIVDSEN HAIRRANIKT RVLETVYPKV IKKSVGLWSW VMEKMGFEKD EETTVDADAK SEESDAPSLM FPWHILKRDD DSLVVINKSF
0401: SKLWIINLAS GEIEEVVEGF QGIMEVYREL ITEKLSVLKH LPSTWLQQQT KAITSCKEQP SAALLSSFSE FGDHIVMTDT AGQRVLKLNR ESGACSSIQF
0501: SNIGILGLPY WLSTPLERVF NLASGVQEAH ISHIHQLRLL PGKISIRLSI EIPQCTELVE PLQESCIWRQ ARGSITEVSN AGSAVEPSEK VGVSQQWYDE
0601: LDNLAKEIVN PELAEEKEEE QEEDVSQVES EDDGRIHIDC SVNTSPGTSE LIVYAALYLR LAKNEETEGA SQEKLARRIA DVLKPARNMT TMDEELFVKV
0701: LLKSKREVRD IVFLKPVHVR IRHLLIFNKK KKRRKRVQRL LEKGFIVREL EKMNCFSCFY FHEKKKTPKD SDNSRRRNGE LTGRDNNKTH PEIPDKTGNE
0801: QNKNNDAEKE MTNNIAAQTF TFRELATATK NFRQECLIGE GGFGRVYKGK LEKCGKIVAV KQLDRNGLQG NKEFIVEVLM LSLLHHKHLV NLIGYCADGD
0901: QRLLVYEYMS RGSLEDHLLD LTPDQVPLDW DTRIRIALGA AMGLEYLHDK ADPPVIYRDL KAANILLDSD FKAKLSDFGL AKLGPVGDKQ HVSSRVMGTY
1001: GYCAPEYQRT GQLTIKSDVY SFGVVLLELI TGRRVIDTTR PKDEQNLVTW AQPVFKEPSR FPELADPSLE GVFPEKALNQ AVAVAAMCLQ EEATVRPLMS
1101: DVVTALGFLG TAPDGSISVP RYDDVSPPQP PGETSREDPA AAEERERAVA EAMEWGVASR AHSRNPSAAQ SLNPSAAQSR NPSAAHSRNP SAS

Best Arabidopsis Sequence Match ( AT3G07060.1 )
(BLAST)

001: MSNRSLHLKK ISWLSSRILS DNVHGRFRRS ITTPATCLAP SLDGDMNIGS KTLVEQRFSR GFASVRRVSR ASSSSSSSPS SPHVDLLSFI KASLDKLEGP
101: SHHWLNRDFG NKQLFKDKGT YVVLAGHLLD GTSDLSGFFE KLKLLQQRSP GVCFMGIHFS DQARIADDRT ALAELILKEY LTFPVLLSEK EFPKTSGEVR
201: YIVFKDFKNP LIYEEKDLDI ASVVKALDSL LTQDTEKSKS VRLFTNTWSK QAEAIKESHF PSFFQDLLLY FPGCISADEV GDRLFLSDTN HHRIIIFENS
301: GKIVDSIGCF PGFEDGDFES AKMLRPTGTL YDEAEDCLYI VDSENHAIRR ANINSRVLET VYPKVIKKTG GLWSWIMEKM GLGKDDDTTV DADTKSEEFD
401: ARSLLFPWHI LKRDDESLLV INKSFSKLWI INFASGEIEE VVEGFSKIIE ICGQSITEKL SVLEHMPSNW LQQQTAAIAS FKEQPSASLL SSFTKLGDDI
501: VMTDIACQRV LKLNRDSGAC SSIQFSNSGI LGLPYWLFIP LERVFNLANG VQEAHLSHTQ ELRLLPGKIS IRLNIEIPPC TELVEPIQES CIWRQTRGAI
601: SEFSSAGSAV EPSEKIGVSQ QWYDELDSLA KEIANPEAAE EEEEEDVNPS EVDREEDGRI HIDCPVKTSP GSSELIVYAA LYLRLARNEE TESATQEELA
701: RKIAKILKPV RNITTMKEDL FVNLLSKSKR ELRDIVFIKP MHVRIRLDSK DHPKADNSRD VILTDSSVEV DVSL

Arabidopsis Description

emb1974NHL domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JD91]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.