Factsheet for Bra029618.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05311	Canola	cytosol	36.83	99.55
CDY24650	Canola	mitochondrion	99.58	99.5
AT3G07070.1	Thale cress	cytosol	32.72	94.2
Bra040358.1-P	Field mustard	cytosol	34.23	92.1
Bra001233.1-P	Field mustard	cytosol	33.72	90.95
Bra036670.1-P	Field mustard	cytosol	21.73	68.52
GSMUA_Achr5P29320_001	Banana	cytosol	20.81	67.95
KRH46760	Soybean	cytosol	23.66	64.53
VIT_07s0005g06450.t01	Wine grape	plastid	22.57	63.0
GSMUA_Achr6P15570_001	Banana	cytosol	20.05	62.57
Bra023944.1-P	Field mustard	cytosol	18.46	62.5
GSMUA_Achr8P02730_001	Banana	cytosol	19.38	61.93
GSMUA_Achr10P...	Banana	cytosol, plastid	21.9	61.27
GSMUA_Achr5P14180_001	Banana	cytosol, mitochondrion, plastid	17.7	61.16
Bra032694.1-P	Field mustard	cytosol	19.63	60.94
KRG99800	Soybean	cytosol	24.25	60.08
Bra028862.1-P	Field mustard	plastid	18.62	59.04
Bra001791.1-P	Field mustard	cytosol	17.95	58.95
PGSC0003DMT400051759	Potato	nucleus	21.64	58.9
Solyc06g083500.2.1	Tomato	nucleus	21.39	58.49
Solyc09g061330.1.1	Tomato	plastid	21.81	58.3
PGSC0003DMT400045499	Potato	cytosol, plastid	21.56	58.14
GSMUA_Achr4P18960_001	Banana	plasma membrane, plastid	20.39	56.12
EES17638	Sorghum	peroxisome, plastid	20.47	54.59
Bra000486.1-P	Field mustard	cytosol	15.52	54.09
Os05t0125400-00	Rice	cytosol	19.8	53.64
Bra016457.1-P	Field mustard	cytosol	16.86	53.32
Bra025835.1-P	Field mustard	cytosol	17.03	53.28
TraesCS1D01G067700.1	Wheat	plastid	19.97	53.12
HORVU1Hr1G013840.1	Barley	mitochondrion	19.8	53.03
TraesCS1B01G085000.1	Wheat	plastid	19.8	52.8
Bra023393.1-P	Field mustard	cytosol	19.97	52.77
TraesCS3D01G543300.1	Wheat	cytosol	17.53	52.51
TraesCS1A01G066700.1	Wheat	peroxisome, plastid	19.71	52.46
Bra021308.1-P	Field mustard	cytosol, plastid	17.03	52.32
Bra028381.1-P	Field mustard	cytosol, nucleus, plastid	16.28	52.15
Bra006184.1-P	Field mustard	cytosol	19.21	51.81
Bra003723.1-P	Field mustard	cytosol	14.09	51.53
TraesCS3A01G537900.1	Wheat	cytosol	17.53	50.98
Bra015756.1-P	Field mustard	cytosol	16.36	50.91
TraesCS3B01G603300.1	Wheat	cytosol, plastid	17.53	50.85
Bra008851.1-P	Field mustard	cytosol	19.38	50.77
HORVU3Hr1G117850.1	Barley	cytosol	16.95	50.5
Bra018678.1-P	Field mustard	cytosol	17.53	50.0
Bra031596.1-P	Field mustard	cytosol	17.53	49.41
Bra030705.1-P	Field mustard	cytosol	17.03	48.68
Zm00001d041938_P001	Maize	plastid	18.71	46.75
Bra002172.1-P	Field mustard	plastid	21.06	45.39
Bra006469.1-P	Field mustard	cytosol	22.65	43.9
Bra040602.1-P	Field mustard	cytosol	18.88	40.69
Bra001065.1-P	Field mustard	cytosol	18.37	38.56
Bra006358.1-P	Field mustard	cytosol	18.04	37.33
Bra008617.1-P	Field mustard	cytosol	17.79	35.81

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:2.120.10.30	Gene3D:3.30.200.20	InterPro:6-blade_b-propeller_TolB-like	EnsemblPlantsGene:Bra029618
EnsemblPlants:Bra029618.1	EnsemblPlants:Bra029618.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR011042
InterPro:Kinase-like_dom_sf	UniProt:M4ELF0	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24104	PANTHER:PTHR24104:SF10	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
SUPFAM:SSF63825	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002548096	SEG:seg	:	:

Description

AT3G07060 (E=2e-305) emb1974 | emb1974 (embryo defective 1974)

Coordinates

chrA05:-:22956520..22962861

Molecular Weight (calculated)

133662.0 Da

IEP (calculated)

5.887

GRAVY (calculated)

-0.385

Length

1192 amino acids

Sequence
(BLAST)

0001: MSSSRSLNLK KISWLSSRIV SGCRRPVAIG GDRDIVSNTL VGTRGFASVK RVSRASSSPH ADLLSYVRAS LDKLEGPSHH WLNRDFETKQ LFKDKGTYLV
0101: LVGDLLNGDP SGFFEKLKLL QQRSPGVCFM GIHFSDQARI TDDRAALAEL IVKEYLTFPV LLSQKEFPKS SGEDVRYFVF RDFKNPLIYQ DKDLDIASVA
0201: KALDSLSQDT EKSKSVKLFT NTWSKQADAI KEPHFSSFLQ DLFFYFPGCI SADEVGDCLF LSDSNHHRII ISNSNGEILD SIGCFPGFED GEFESAKMLR
0301: PAATLYDEEE DCLYIVDSEN HAIRRANIKT RVLETVYPKV IKKSVGLWSW VMEKMGFEKD EETTVDADAK SEESDAPSLM FPWHILKRDD DSLVVINKSF
0401: SKLWIINLAS GEIEEVVEGF QGIMEVYREL ITEKLSVLKH LPSTWLQQQT KAITSCKEQP SAALLSSFSE FGDHIVMTDT AGQRVLKLNR ESGACSSIQF
0501: SNIGILGFPY WLSTPLERVF NLASGVQEAH ISHIHQLRLL PGKISIRLSI EIPQCTELVE PLQESCIWRQ ARGSITEVSN AGSAVEPSEK VGVSQQWYDE
0601: LDNLAKEIVN PELAEEKEEE QEEDVSQVES EDDGRIHIDC SVNTSPGTSE LIVYAALYLR LAKNEETEGA SQEKLARRIA DVLKPARNMT TMDEELFVKV
0701: LLKSKREVRD IVFLKPVHVR IRHLLIFNKK KRRKRVQRLL EKGFIVRELE KMNCFSCFYF HEKKKTPKDS DNSRRRNGEL TGRDNNKTHP EIPDKTGNEQ
0801: NKNNDAEKEM TNNIAAQTFT FRELATATKN FRQECLIGEG GFGRVYKGKL EKCGKIVAVK QLDRNGLQGN KEFIVEVLML SLLHHKHLVN LIGYCADGDQ
0901: RLLVYEYMSR GSLEDHLLDL TPDQVPLDWD TRIRIALGAA MGLEYLHDKA DPPVIYRDLK AANILLDSDF NAKLSDFGLA KLGPVGDKQH VSSRVMGTYG
1001: YCAPEYQRTG QLTIKSDVYS FGVVLLELIT GRRVIDTTRP KDEQNLVTWA QPVFKEPSRF PELADPSLEG VFPEKALNQA VAVAAMCLQE EATVRPLMSD
1101: VVTALGFLGT APDGSISVPR YDDVSPPQPP GETSREDPAA AEERERAVAE AMEWGVASRA HSRNPSAAQS LNPSAAQSRN PSAAHSRNPS AS

Best Arabidopsis Sequence Match ( AT3G07060.1 )
(BLAST)

001: MSNRSLHLKK ISWLSSRILS DNVHGRFRRS ITTPATCLAP SLDGDMNIGS KTLVEQRFSR GFASVRRVSR ASSSSSSSPS SPHVDLLSFI KASLDKLEGP
101: SHHWLNRDFG NKQLFKDKGT YVVLAGHLLD GTSDLSGFFE KLKLLQQRSP GVCFMGIHFS DQARIADDRT ALAELILKEY LTFPVLLSEK EFPKTSGEVR
201: YIVFKDFKNP LIYEEKDLDI ASVVKALDSL LTQDTEKSKS VRLFTNTWSK QAEAIKESHF PSFFQDLLLY FPGCISADEV GDRLFLSDTN HHRIIIFENS
301: GKIVDSIGCF PGFEDGDFES AKMLRPTGTL YDEAEDCLYI VDSENHAIRR ANINSRVLET VYPKVIKKTG GLWSWIMEKM GLGKDDDTTV DADTKSEEFD
401: ARSLLFPWHI LKRDDESLLV INKSFSKLWI INFASGEIEE VVEGFSKIIE ICGQSITEKL SVLEHMPSNW LQQQTAAIAS FKEQPSASLL SSFTKLGDDI
501: VMTDIACQRV LKLNRDSGAC SSIQFSNSGI LGLPYWLFIP LERVFNLANG VQEAHLSHTQ ELRLLPGKIS IRLNIEIPPC TELVEPIQES CIWRQTRGAI
601: SEFSSAGSAV EPSEKIGVSQ QWYDELDSLA KEIANPEAAE EEEEEDVNPS EVDREEDGRI HIDCPVKTSP GSSELIVYAA LYLRLARNEE TESATQEELA
701: RKIAKILKPV RNITTMKEDL FVNLLSKSKR ELRDIVFIKP MHVRIRLDSK DHPKADNSRD VILTDSSVEV DVSL

Arabidopsis Description

emb1974NHL domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JD91]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.