Factsheet for Solyc09g061330.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400045499	Potato	cytosol, plastid	95.96	96.83
Bra036670.1-P	Field mustard	cytosol	56.28	66.4
CDY39784	Canola	cytosol, plastid	56.05	66.14
CDY03295	Canola	cytosol	55.83	65.87
AT3G24790.2	Thale cress	plastid	54.93	64.3
GSMUA_Achr5P29320_001	Banana	cytosol	52.47	64.11
Solyc06g083500.2.1	Tomato	nucleus	62.33	63.76
KRH46760	Soybean	cytosol	62.11	63.39
CDY65598	Canola	cytosol	54.71	62.56
AT3G07070.1	Thale cress	cytosol	58.07	62.56
VIT_07s0005g06450.t01	Wine grape	plastid	58.52	61.12
GSMUA_Achr6P15570_001	Banana	cytosol	52.24	60.99
GSMUA_Achr10P...	Banana	cytosol, plastid	57.17	59.86
Bra001233.1-P	Field mustard	cytosol	58.97	59.5
CDX74065	Canola	cytosol	58.97	59.5
CDY08017	Canola	cytosol	58.97	59.5
Solyc10g085990.1.1	Tomato	plastid	49.33	59.3
CDY05311	Canola	cytosol	58.52	59.18
AT4G13190.1	Thale cress	cytosol	51.12	58.61
GSMUA_Achr8P02730_001	Banana	cytosol	48.65	58.18
CDY66752	Canola	cytosol	56.5	57.93
GSMUA_Achr5P14180_001	Banana	cytosol, mitochondrion, plastid	44.62	57.68
CDY34917	Canola	cytosol	56.5	56.88
Bra040358.1-P	Field mustard	cytosol	56.5	56.88
CDY47330	Canola	cytosol	48.43	56.69
Solyc10g005300.2.1	Tomato	cytosol, mitochondrion	49.33	56.56
Solyc09g007170.2.1	Tomato	cytosol, mitochondrion, nucleus	49.55	56.52
CDY01117	Canola	cytosol	48.21	56.43
Bra032694.1-P	Field mustard	cytosol	48.21	55.99
KRG99800	Soybean	cytosol	59.42	55.09
Solyc04g082510.2.1	Tomato	plastid	45.52	54.86
TraesCS3D01G543300.1	Wheat	cytosol	47.09	52.76
Solyc10g006340.2.1	Tomato	cytosol	47.98	52.71
Solyc12g094680.1.1	Tomato	cytosol	47.09	52.5
TraesCS1D01G067700.1	Wheat	plastid	52.47	52.23
Solyc12g005160.1.1	Tomato	cytosol	47.09	52.11
Solyc05g024290.2.1	Tomato	cytosol	54.26	52.04
HORVU1Hr1G013840.1	Barley	mitochondrion	51.79	51.91
EES17638	Sorghum	peroxisome, plastid	51.79	51.68
TraesCS1A01G066700.1	Wheat	peroxisome, plastid	51.79	51.56
TraesCS1B01G085000.1	Wheat	plastid	51.57	51.45
GSMUA_Achr4P18960_001	Banana	plasma membrane, plastid	49.78	51.27
TraesCS3A01G537900.1	Wheat	cytosol	47.09	51.22
TraesCS3B01G603300.1	Wheat	cytosol, plastid	47.09	51.09
HORVU3Hr1G117850.1	Barley	cytosol	45.52	50.75
Os05t0125400-00	Rice	cytosol	49.78	50.45
Solyc06g075550.2.1	Tomato	cytosol, nucleus	46.19	50.12
Solyc07g064340.2.1	Tomato	plasma membrane	46.19	49.76
Solyc01g067400.2.1	Tomato	cytosol	55.61	48.53
Solyc02g094380.1.1	Tomato	cytosol	44.39	46.48
Solyc05g055860.2.1	Tomato	cytosol	48.43	44.44
Zm00001d041938_P001	Maize	plastid	46.64	43.61
Solyc11g072660.1.1	Tomato	cytosol	46.41	43.12
Solyc04g050970.2.1	Tomato	plastid	49.55	39.39
Bra029618.1-P	Field mustard	mitochondrion	58.3	21.81
CDY24650	Canola	mitochondrion	58.07	21.71

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
UniProt:K4CTW6	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF48	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc09g061330.1	EnsemblPlants:Solyc09g061330.1.1	UniParc:UPI000276BB3E	SEG:seg

Description

No Description!

Coordinates

chr9:-:58717095..58719842

Molecular Weight (calculated)

49855.4 Da

IEP (calculated)

8.860

GRAVY (calculated)

-0.492

Length

446 amino acids

Sequence
(BLAST)

001: MGCFSCFSSQ EKKAFKRIHS KSKETTDVVR QRETLLNQQQ QQRPHSLSRP KPQQDHRSHS QPLSENTRKV PAETPHQKSS NKGKGQNIAA QTFTFRELAT
101: ATKNFRSECL IGEGGFGRVY KGHLNKTGQT VAVKQLDRNG LQGNREFLVE VLMLSLLHHS NLVNLIGYCA DGDQRLLVYE YMSLGSLEDH LLDLERDKLP
201: LDWFTRMKIA LHAAKGLEYL HHRANPPVIY RDLKSSNILL DKEHNAKLSD FGLAKVGPTG ENTHVSSRVM GTYGYCAPEY QQTGKLTIKS DVYSFGVVLL
301: ELITGRRAVD ITRFGHQQNL VTWAEPIFKD TKRHIELADP LLGANFPRKS FSQAVAIASM CLQDDPVVRP LISDVVTALS TLSTPETELV SPFASPTRAP
401: SPMHMSTEEN IISTRECQDE VAEAIEWGSN SRKQNARSLA SCGSSV

Best Arabidopsis Sequence Match ( AT3G07070.1 )
(BLAST)

001: MNCFSCFYFH EKKKVPRDSD NSYRRNGEVT GRDNNKTHPE NPKTVNEQNK NNDEDKEVTN NIAAQTFSFR ELATATKNFR QECLIGEGGF GRVYKGKLEK
101: TGMIVAVKQL DRNGLQGNKE FIVEVLMLSL LHHKHLVNLI GYCADGDQRL LVYEYMSRGS LEDHLLDLTP DQIPLDWDTR IRIALGAAMG LEYLHDKANP
201: PVIYRDLKAA NILLDGEFNA KLSDFGLAKL GPVGDKQHVS SRVMGTYGYC APEYQRTGQL TTKSDVYSFG VVLLELITGR RVIDTTRPKD EQNLVTWAQP
301: VFKEPSRFPE LADPSLEGVF PEKALNQAVA VAAMCLQEEA TVRPLMSDVV TALGFLGTAP DGSISVPHYD DPPQPSDETS VEDSVAAEER ERAVAEAMEW
401: GVASRAHSRN PSAS

Arabidopsis Description

PBL26Probable serine/threonine-protein kinase PBL26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.