Factsheet for Solyc12g005160.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400002807	Potato	cytosol	97.52	96.32
CDY57665	Canola	cytosol	51.86	72.82
Bra023944.1-P	Field mustard	cytosol	60.79	69.6
Bra001791.1-P	Field mustard	cytosol	61.54	68.32
VIT_19s0090g00030.t01	Wine grape	mitochondrion	59.31	67.9
Solyc10g006340.2.1	Tomato	cytosol	68.24	67.73
CDY29433	Canola	mitochondrion	62.28	67.66
KRH14431	Soybean	cytosol	63.28	67.28
CDY36035	Canola	cytosol	62.03	67.2
CDX82241	Canola	cytosol	62.03	67.2
CDY19633	Canola	cytosol, mitochondrion	61.29	66.94
AT3G20530.1	Thale cress	mitochondrion	63.28	66.06
Solyc07g064340.2.1	Tomato	plasma membrane	67.49	65.7
KRH73720	Soybean	plastid	61.79	65.7
KRH46122	Soybean	cytosol	67.0	65.53
CDY43074	Canola	mitochondrion	58.31	64.74
CDY55594	Canola	plastid	58.06	64.29
Solyc10g085990.1.1	Tomato	plastid	53.1	57.68
Solyc09g007170.2.1	Tomato	cytosol, mitochondrion, nucleus	53.85	55.5
Solyc10g005300.2.1	Tomato	cytosol, mitochondrion	52.85	54.76
Solyc04g082510.2.1	Tomato	plastid	46.65	50.81
Solyc06g075550.2.1	Tomato	cytosol, nucleus	49.13	48.18
Solyc05g024290.2.1	Tomato	cytosol	55.09	47.74
Solyc09g061330.1.1	Tomato	plastid	52.11	47.09
Solyc06g083500.2.1	Tomato	nucleus	50.62	46.79
Solyc12g094680.1.1	Tomato	cytosol	45.66	46.0
Solyc01g067400.2.1	Tomato	cytosol	57.07	45.01
Solyc11g072660.1.1	Tomato	cytosol	49.38	41.46
Solyc02g094380.1.1	Tomato	cytosol	41.69	39.44
Solyc05g055860.2.1	Tomato	cytosol	46.4	38.48
Solyc04g050970.2.1	Tomato	plastid	48.64	34.94

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
UniProt:K4DB54	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF127	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc12g005160.1	EnsemblPlants:Solyc12g005160.1.1	UniParc:UPI000276A174	SEG:seg	:

Description

No Description!

Coordinates

chr12:+:117402..119412

Molecular Weight (calculated)

44992.0 Da

IEP (calculated)

4.787

GRAVY (calculated)

-0.476

Length

403 amino acids

Sequence
(BLAST)

001: MSSSSDQDKI NHTNSLAKSI HHQEQQKDTK SIASFANISI KTDSSRRKYI VEEIEKYGKG NISAQTITYN DLCLATNNFD SECLLGEGGF GKVYKGHIQS
101: KNKDVAVKQL DRNGFQGNRE FLVEVLLLSL LHHPNLVTLE AYCSDGDQRV LVYEFMSNGS LEDHLLEIGP EQKPLDWITR MKIAEGAAKG LEYLHETANP
201: SVIYRDFKAS NILLDEKFNP KLSDFGLAKL GPTGDKTHVS TRVMGTYGYC APEYASTGQL TTKSDVYSFG VVFLEIITGR RVIDNSLPSE EQNLVVWATP
301: LFRDKTKFHL MADPLMGEDY PMKALYQALA IAAMCLQEEA GTRPLMSDVV TALEFLSGNK KELDAEDEDE DEDEEGTCKS PPALQSFTSR LERADTNGIR
401: ERD

Best Arabidopsis Sequence Match ( AT3G20530.1 )
(BLAST)

001: MKINCLFCCM SHRRFNRRSS SRQSIKDCID AKNNITTFDN ISFKTDSSRR RYISEEIAKL GKGNISAHIF TFRELCVATK NFNPDNQLGE GGFGRVYKGQ
101: IETPEQVVAV KQLDRNGYQG NREFLVEVMM LSLLHHQNLV NLVGYCADGD QRILVYEYMQ NGSLEDHLLE LARNKKKPLD WDTRMKVAAG AARGLEYLHE
201: TADPPVIYRD FKASNILLDE EFNPKLSDFG LAKVGPTGGE THVSTRVMGT YGYCAPEYAL TGQLTVKSDV YSFGVVFLEM ITGRRVIDTT KPTEEQNLVT
301: WASPLFKDRR KFTLMADPLL EGKYPIKGLY QALAVAAMCL QEEAATRPMM SDVVTALEYL AVTKTEEDGQ TVEGEEEEEE DERSKL

Arabidopsis Description

PBL23Probable serine/threonine-protein kinase PBL23 [Source:UniProtKB/Swiss-Prot;Acc:F4JEQ2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.