Factsheet for VIT_19s0090g00030.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57665	Canola	cytosol	61.08	74.91
Bra023944.1-P	Field mustard	cytosol	72.16	72.16
Bra001791.1-P	Field mustard	cytosol	69.03	66.94
CDY29433	Canola	mitochondrion	70.17	66.58
CDY19633	Canola	cytosol, mitochondrion	69.6	66.4
AT3G20530.1	Thale cress	mitochondrion	72.44	66.06
CDX82241	Canola	cytosol	69.6	65.86
CDY36035	Canola	cytosol	69.6	65.86
KRH73720	Soybean	plastid	70.17	65.17
VIT_10s0116g00850.t01	Wine grape	cytosol	67.05	65.01
KRH14431	Soybean	cytosol	69.6	64.64
CDY55594	Canola	plastid	66.76	64.56
CDY43074	Canola	mitochondrion	66.19	64.19
PGSC0003DMT400037295	Potato	cytosol	69.6	61.87
VIT_19s0014g00940.t01	Wine grape	cytosol, plastid	73.58	60.51
Solyc10g006340.2.1	Tomato	cytosol	69.32	60.1
KRH46122	Soybean	cytosol	70.17	59.95
Solyc12g005160.1.1	Tomato	cytosol	67.9	59.31
PGSC0003DMT400002807	Potato	cytosol	68.47	59.07
PGSC0003DMT400036145	Potato	cytosol	65.91	58.88
VIT_13s0067g03410.t01	Wine grape	cytosol	62.5	58.51
VIT_08s0040g03060.t01	Wine grape	nucleus	64.77	57.58
Solyc07g064340.2.1	Tomato	plasma membrane	65.34	55.56
VIT_03s0038g03810.t01	Wine grape	cytosol	54.26	52.33
VIT_18s0122g01240.t01	Wine grape	cytosol	57.39	50.37
VIT_07s0005g06450.t01	Wine grape	plastid	60.23	49.65
VIT_01s0146g00250.t01	Wine grape	cytosol	63.92	48.49
VIT_06s0004g03670.t01	Wine grape	cytosol, plastid	59.09	48.15
VIT_14s0068g01540.t01	Wine grape	cytosol	53.41	44.55
VIT_05s0020g01770.t01	Wine grape	cytosol	65.62	43.75
VIT_04s0043g01030.t01	Wine grape	cytosol, plastid	57.1	43.51

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100258950	wikigene:100258950	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	ProteinID:CBI26605
ProteinID:CBI26605.3	UniProt:D7T893	EMBL:FN595751	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100258950	wikigene:LOC100258950
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF127	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001BE2B3B
ArrayExpress:VIT_19s0090g00030	EnsemblPlantsGene:VIT_19s0090g00030	EnsemblPlants:VIT_19s0090g00030.t01	RefSeq:XP_002278723	RefSeq:XP_002278723.2	:

Description

No Description!

Coordinates

chr19:-:6231278..6232754

Molecular Weight (calculated)

39201.5 Da

IEP (calculated)

5.147

GRAVY (calculated)

-0.339

Length

352 amino acids

Sequence
(BLAST)

001: MIHAASSKRR YITKIGQGNL STRIFTFREL CSATKNFKRE CLLGEGGFGR VYKGYIDNPS QAVAVKQLDR NGFQGNREFL VEVLMLSLLH HPNLVNLVGY
101: CADGDQRILV YEYMANGSLE DHLLGLSQNR KPLDWITRMR IAEGAARGLE HLHETANPPV IYRDFKASNI LLDEDFNPKL SDFGLAKVGP TGDNTHVSTR
201: VMGTYGYCAP EYALTGRLTT MSDVYSFGVV FLEIITGRRV IDYSRPRNEQ NLVTWAQPLL KDRRNFKLMA DPSLEGNYPT KGLYQAIAVA AMCLQEEAST
301: RPLITDVVIA LAHLAGNDIE DEGAEEDDVA SDTVDGNSDD RGIETEDTPE AR

Best Arabidopsis Sequence Match ( AT3G20530.1 )
(BLAST)

001: MKINCLFCCM SHRRFNRRSS SRQSIKDCID AKNNITTFDN ISFKTDSSRR RYISEEIAKL GKGNISAHIF TFRELCVATK NFNPDNQLGE GGFGRVYKGQ
101: IETPEQVVAV KQLDRNGYQG NREFLVEVMM LSLLHHQNLV NLVGYCADGD QRILVYEYMQ NGSLEDHLLE LARNKKKPLD WDTRMKVAAG AARGLEYLHE
201: TADPPVIYRD FKASNILLDE EFNPKLSDFG LAKVGPTGGE THVSTRVMGT YGYCAPEYAL TGQLTVKSDV YSFGVVFLEM ITGRRVIDTT KPTEEQNLVT
301: WASPLFKDRR KFTLMADPLL EGKYPIKGLY QALAVAAMCL QEEAATRPMM SDVVTALEYL AVTKTEEDGQ TVEGEEEEEE DERSKL

Arabidopsis Description

PBL23Probable serine/threonine-protein kinase PBL23 [Source:UniProtKB/Swiss-Prot;Acc:F4JEQ2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.