Factsheet for VIT_19s0014g00940.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0090g00030.t01	Wine grape	mitochondrion	60.51	73.58
VIT_10s0116g00850.t01	Wine grape	cytosol	59.35	69.97
VIT_13s0067g03410.t01	Wine grape	cytosol	55.14	62.77
VIT_08s0040g03060.t01	Wine grape	nucleus	55.14	59.6
VIT_03s0038g03810.t01	Wine grape	cytosol	47.43	55.62
VIT_01s0146g00250.t01	Wine grape	cytosol	57.01	52.59
VIT_18s0122g01240.t01	Wine grape	cytosol	48.6	51.87
VIT_07s0005g06450.t01	Wine grape	plastid	51.64	51.76
VIT_06s0004g03670.t01	Wine grape	cytosol, plastid	49.3	48.84
VIT_05s0020g01770.t01	Wine grape	cytosol	58.41	47.35
VIT_04s0043g01030.t01	Wine grape	cytosol, plastid	50.7	46.97
VIT_14s0068g01540.t01	Wine grape	cytosol	45.79	46.45

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100252025	wikigene:100252025	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EMBL:AM474084
ProteinID:CAN68395	ProteinID:CAN68395.1	ProteinID:CCB46226	ProteinID:CCB46226.1	ncoils:Coil	UniProt:F6H1W2
EMBL:FN595229	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166
GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100252025
wikigene:LOC100252025	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF127	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI00015C7729	ArrayExpress:VIT_19s0014g00940	EnsemblPlantsGene:VIT_19s0014g00940	EnsemblPlants:VIT_19s0014g00940.t01	RefSeq:XP_002283397	RefSeq:XP_002283397.2
RefSeq:XP_002283397.3	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr19:+:974833..977913

Molecular Weight (calculated)

47650.0 Da

IEP (calculated)

4.587

GRAVY (calculated)

-0.551

Length

428 amino acids

Sequence
(BLAST)

001: MGCFACCMSD PNVGSKSLKK SIKEYGDAKR LASFVNISFK SDGSKRRYIA EEIAKMGKGS IPAHVFTIGE LSAATNNFNH EALIGEGGFG RVYKGHVEKT
101: NNSVAVKRLD RNGFQGNREF LVEVFMLSLL HHTNLVNMVG YCCDGDQRIL VYEYMANGSL EDHLLDLAPN KKPLDWKTRM KIAEGAARGL EYLHDTANPP
201: VIYRDFKASN ILLDEDFNPK LSDFGLAKLG PTGDKTHVST RVMGTYGYCA PEYALTGQLT TMSDVYSFGV VLLEIITGRR VIDNSRPTEE QNLVTWAQPL
301: LKDRRKFTLM ADPLLEGNYP IKGLYQALAV AAMCLQEEAT IRPLMSDVVM ALEYLSDKRA AGVDGDEEDE DTNKNEDEGE EEEEEEEEEE IKDTTSSDRN
401: RSGGIETDHD EDNGESNGKT TKKEEDIQ

Best Arabidopsis Sequence Match ( AT3G20530.1 )
(BLAST)

001: MKINCLFCCM SHRRFNRRSS SRQSIKDCID AKNNITTFDN ISFKTDSSRR RYISEEIAKL GKGNISAHIF TFRELCVATK NFNPDNQLGE GGFGRVYKGQ
101: IETPEQVVAV KQLDRNGYQG NREFLVEVMM LSLLHHQNLV NLVGYCADGD QRILVYEYMQ NGSLEDHLLE LARNKKKPLD WDTRMKVAAG AARGLEYLHE
201: TADPPVIYRD FKASNILLDE EFNPKLSDFG LAKVGPTGGE THVSTRVMGT YGYCAPEYAL TGQLTVKSDV YSFGVVFLEM ITGRRVIDTT KPTEEQNLVT
301: WASPLFKDRR KFTLMADPLL EGKYPIKGLY QALAVAAMCL QEEAATRPMM SDVVTALEYL AVTKTEEDGQ TVEGEEEEEE DERSKL

Arabidopsis Description

PBL23Probable serine/threonine-protein kinase PBL23 [Source:UniProtKB/Swiss-Prot;Acc:F4JEQ2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.