Factsheet for VIT_10s0116g00850.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0090g00030.t01	Wine grape	mitochondrion	65.01	67.05
Solyc10g005300.2.1	Tomato	cytosol, mitochondrion	64.74	60.41
PGSC0003DMT400029366	Potato	cytosol, mitochondrion	64.46	60.31
VIT_19s0014g00940.t01	Wine grape	cytosol, plastid	69.97	59.35
VIT_13s0067g03410.t01	Wine grape	cytosol	61.43	59.31
Bra021308.1-P	Field mustard	cytosol, plastid	61.71	57.73
CDY24861	Canola	cytosol, plastid	61.43	57.47
AT1G61860.1	Thale cress	cytosol	61.43	57.33
CDY25327	Canola	cytosol, plastid	61.43	56.74
CDY47164	Canola	cytosol, plastid	61.43	56.74
VIT_08s0040g03060.t01	Wine grape	nucleus	61.71	56.57
Bra028381.1-P	Field mustard	cytosol, nucleus, plastid	57.85	56.45
KRH11410	Soybean	plastid	59.78	55.64
VIT_03s0038g03810.t01	Wine grape	cytosol	52.89	52.6
CDY07261	Canola	cytosol, plastid	37.19	52.53
VIT_18s0122g01240.t01	Wine grape	cytosol	55.92	50.62
KRH20875	Soybean	cytosol, plastid	59.23	50.59
VIT_07s0005g06450.t01	Wine grape	plastid	59.23	50.35
VIT_01s0146g00250.t01	Wine grape	cytosol	63.09	49.35
VIT_06s0004g03670.t01	Wine grape	cytosol, plastid	58.68	49.31
VIT_14s0068g01540.t01	Wine grape	cytosol	52.89	45.5
VIT_04s0043g01030.t01	Wine grape	cytosol, plastid	57.85	45.45
VIT_05s0020g01770.t01	Wine grape	cytosol	64.46	44.32
Os05t0463000-01	Rice	cytosol, mitochondrion, plastid	49.04	42.69
Zm00001d038394_P002	Maize	cytosol	49.59	42.25
EES19660	Sorghum	cytosol	49.31	41.82
TraesCS1B01G297300.1	Wheat	cytosol	47.11	40.24
TraesCS1D01G286800.1	Wheat	cytosol	47.11	39.31
Zm00001d010548_P001	Maize	mitochondrion	49.31	38.66
HORVU1Hr1G071750.3	Barley	cytosol	45.73	38.6
TraesCS1A01G287900.1	Wheat	cytosol	46.83	36.48
CDY07262	Canola	cytosol	5.79	35.59

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100264109	wikigene:100264109	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EMBL:AM482217
ProteinID:CAN68637	ProteinID:CAN68637.1	ProteinID:CCB48175	ProteinID:CCB48175.1	UniProt:F6H7M8	EMBL:FN595248
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100264109	wikigene:LOC100264109
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF127	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000210872B
ArrayExpress:VIT_10s0116g00850	EnsemblPlantsGene:VIT_10s0116g00850	EnsemblPlants:VIT_10s0116g00850.t01	RefSeq:XP_002264503	RefSeq:XP_002264503.2	RefSeq:XP_010655363.1

Description

No Description!

Coordinates

chr10:-:394011..396081

Molecular Weight (calculated)

40305.6 Da

IEP (calculated)

6.083

GRAVY (calculated)

-0.221

Length

363 amino acids

Sequence
(BLAST)

001: MEEMNCILCC RLTGDNTVEK KKSIEENKDD KTVASFVKDI AWKSAGTDKK GTLTKEILKA GNPKISAQVF TFRELATATS NFRAECLLGE GGFGRVYKGH
101: INNQDVAVKQ LDRNGVQGNR EFLAEVLMLS LVHHPNLVNL MGYCAEGDQR ILVYEYMPNG SLENLLFDLP PNQEPLDWIT RMKIAEGAAK GLEFLHEGAN
201: PPVIYRDFKA SNILLDEEFN PKLSDFGLAK LGPTGGQDHV STRVMGTYGY CAPEYALTGK LTTKSDVYSF GVMFLEMITG RRVIDTTRPT EEQNLISWAA
301: PLFRDKKKFT LMADPLLEGK YPVKSLYQAL AVAAMCLQEE ASTRPLISDV VAALEFLARP KAV

Best Arabidopsis Sequence Match ( AT3G20530.1 )
(BLAST)

001: MKINCLFCCM SHRRFNRRSS SRQSIKDCID AKNNITTFDN ISFKTDSSRR RYISEEIAKL GKGNISAHIF TFRELCVATK NFNPDNQLGE GGFGRVYKGQ
101: IETPEQVVAV KQLDRNGYQG NREFLVEVMM LSLLHHQNLV NLVGYCADGD QRILVYEYMQ NGSLEDHLLE LARNKKKPLD WDTRMKVAAG AARGLEYLHE
201: TADPPVIYRD FKASNILLDE EFNPKLSDFG LAKVGPTGGE THVSTRVMGT YGYCAPEYAL TGQLTVKSDV YSFGVVFLEM ITGRRVIDTT KPTEEQNLVT
301: WASPLFKDRR KFTLMADPLL EGKYPIKGLY QALAVAAMCL QEEAATRPMM SDVVTALEYL AVTKTEEDGQ TVEGEEEEEE DERSKL

Arabidopsis Description

PBL23Probable serine/threonine-protein kinase PBL23 [Source:UniProtKB/Swiss-Prot;Acc:F4JEQ2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.