Factsheet for PGSC0003DMT400029366

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g005300.2.1	Tomato	cytosol, mitochondrion	97.16	96.92
VIT_10s0116g00850.t01	Wine grape	cytosol	60.31	64.46
CDY24861	Canola	cytosol, plastid	58.51	58.51
Bra021308.1-P	Field mustard	cytosol, plastid	58.25	58.25
AT1G61860.1	Thale cress	cytosol	57.73	57.58
Bra028381.1-P	Field mustard	cytosol, nucleus, plastid	55.15	57.53
CDY47164	Canola	cytosol, plastid	58.25	57.51
CDY25327	Canola	cytosol, plastid	57.99	57.25
PGSC0003DMT400037295	Potato	cytosol	56.96	55.81
PGSC0003DMT400045344	Potato	plastid	53.35	55.8
PGSC0003DMT400071735	Potato	cytosol, mitochondrion, nucleus	54.12	53.85
PGSC0003DMT400036145	Potato	cytosol	54.12	53.3
KRH11410	Soybean	plastid	53.35	53.08
PGSC0003DMT400025866	Potato	cytosol	50.26	52.7
PGSC0003DMT400002807	Potato	cytosol	55.41	52.7
CDY07261	Canola	cytosol, plastid	33.51	50.58
PGSC0003DMT400045499	Potato	cytosol, plastid	57.22	50.23
PGSC0003DMT400021929	Potato	cytosol	58.51	48.5
PGSC0003DMT400016900	Potato	cytosol	51.03	48.29
KRH20875	Soybean	cytosol, plastid	52.84	48.24
PGSC0003DMT400051759	Potato	nucleus	54.38	48.17
PGSC0003DMT400065260	Potato	cytosol	52.06	43.63
Os05t0463000-01	Rice	cytosol, mitochondrion, plastid	46.13	42.93
CDY07262	Canola	cytosol	6.44	42.37
EES19660	Sorghum	cytosol	46.39	42.06
Zm00001d038394_P002	Maize	cytosol	45.88	41.78
TraesCS1B01G297300.1	Wheat	cytosol	45.36	41.41
TraesCS1D01G286800.1	Wheat	cytosol	45.1	40.23
HORVU1Hr1G071750.3	Barley	cytosol	44.07	39.77
Zm00001d010548_P001	Maize	mitochondrion	45.88	38.44
PGSC0003DMT400060019	Potato	cytosol	49.48	38.32
PGSC0003DMT400052190	Potato	cytosol	44.07	38.08
TraesCS1A01G287900.1	Wheat	cytosol	44.85	37.34
PGSC0003DMT400031291	Potato	cytosol	52.58	36.43

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102596450	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1ASP0	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400011284
PGSC:PGSC0003DMG400011284	EnsemblPlants:PGSC0003DMT400029366	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF127	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000294A885	RefSeq:XP_006352608.1	:	:	:	:

Description

Receptor serine-threonine protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400011284]

Coordinates

chr10:+:346310..349069

Molecular Weight (calculated)

43513.9 Da

IEP (calculated)

4.905

GRAVY (calculated)

-0.305

Length

388 amino acids

Sequence
(BLAST)

001: MRKTHLKSSR SSVYETRTTS KYDDSEGLAT MLRSATMHPG VGKQNMMAED ILRYGNVNIS AEVFTFRELA HATDNFNPEF LVGEGGFGRV YKGHLKRTDQ
101: VVAVKQLDRN GVQGNREFLA EVLNLSLINH PNLVNLIGYC ADGNQRILVY EFMQNGSLED HLLDFPSNKK PLDWYTRMKI AKGAAQGLEY LHDIANPPII
201: YRDFKASNIL LDECLIPKLS DFGLAKLGPA EGEDHVSTRV MGTYGYCAPE YAMTEQLTSR SDVYSFGVVL LELISGRRAI DNTRPPEEQN LISWAKPLFK
301: DKNMLTEMAD PLLGGNYPVM ELHQALAIAN MCIQDEAYTR PLISDVVTAL EYLAMPRDDE VTISKTEVEY SADELCLKDL TTETNCVS

Best Arabidopsis Sequence Match ( AT3G20530.1 )
(BLAST)

001: MKINCLFCCM SHRRFNRRSS SRQSIKDCID AKNNITTFDN ISFKTDSSRR RYISEEIAKL GKGNISAHIF TFRELCVATK NFNPDNQLGE GGFGRVYKGQ
101: IETPEQVVAV KQLDRNGYQG NREFLVEVMM LSLLHHQNLV NLVGYCADGD QRILVYEYMQ NGSLEDHLLE LARNKKKPLD WDTRMKVAAG AARGLEYLHE
201: TADPPVIYRD FKASNILLDE EFNPKLSDFG LAKVGPTGGE THVSTRVMGT YGYCAPEYAL TGQLTVKSDV YSFGVVFLEM ITGRRVIDTT KPTEEQNLVT
301: WASPLFKDRR KFTLMADPLL EGKYPIKGLY QALAVAAMCL QEEAATRPMM SDVVTALEYL AVTKTEEDGQ TVEGEEEEEE DERSKL

Arabidopsis Description

PBL23Probable serine/threonine-protein kinase PBL23 [Source:UniProtKB/Swiss-Prot;Acc:F4JEQ2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.