Factsheet for PGSC0003DMT400036145

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g064340.2.1	Tomato	plasma membrane	94.67	90.1
PGSC0003DMT400002807	Potato	cytosol	69.54	67.16
CDY57665	Canola	cytosol	48.73	66.9
VIT_19s0090g00030.t01	Wine grape	mitochondrion	58.88	65.91
Bra023944.1-P	Field mustard	cytosol	58.88	65.91
PGSC0003DMT400037295	Potato	cytosol	66.24	65.91
Bra001791.1-P	Field mustard	cytosol	59.64	64.74
CDX82241	Canola	cytosol	60.15	63.71
CDY29433	Canola	mitochondrion	59.9	63.61
CDY36035	Canola	cytosol	59.64	63.17
CDY19633	Canola	cytosol, mitochondrion	59.14	63.14
AT3G20530.1	Thale cress	mitochondrion	61.42	62.69
KRH14431	Soybean	cytosol	59.64	62.01
CDY43074	Canola	mitochondrion	57.11	61.98
CDY55594	Canola	plastid	56.85	61.54
KRH73720	Soybean	plastid	59.14	61.48
KRH46122	Soybean	cytosol	61.17	58.5
PGSC0003DMT400045344	Potato	plastid	51.02	54.18
PGSC0003DMT400029366	Potato	cytosol, mitochondrion	53.3	54.12
PGSC0003DMT400071735	Potato	cytosol, mitochondrion, nucleus	52.54	53.08
PGSC0003DMT400025866	Potato	cytosol	48.73	51.89
PGSC0003DMT400021929	Potato	cytosol	55.58	46.79
PGSC0003DMT400016900	Potato	cytosol	48.48	46.59
PGSC0003DMT400045499	Potato	cytosol, plastid	51.52	45.93
PGSC0003DMT400051759	Potato	nucleus	48.98	44.06
PGSC0003DMT400065260	Potato	cytosol	49.24	41.9
PGSC0003DMT400052190	Potato	cytosol	43.4	38.08
PGSC0003DMT400060019	Potato	cytosol	45.69	35.93
PGSC0003DMT400031291	Potato	cytosol	50.0	35.18

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1B3C0	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG401013919	PGSC:PGSC0003DMG401013919
EnsemblPlants:PGSC0003DMT400036145	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF127	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002962A62
SEG:seg	:	:	:	:	:

Description

Receptor serine-threonine protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG401013919]

Coordinates

chr7:-:54618427..54621979

Molecular Weight (calculated)

44019.6 Da

IEP (calculated)

7.765

GRAVY (calculated)

-0.359

Length

394 amino acids

Sequence
(BLAST)

001: MDDNNQISSL EDSIIHQCKN ANSPAQFTNI SLKTDSSRRR YIATEIEKFG KGNISAQAFT FRELCLATQN FDYECLLGSG GFGKVYKGHI KSKNMAVAVK
101: QLDRNGFQGT KEFLVEVLLL SLLRHSNLVN LIGYCSDGDQ RILVYELMPN DSLEGHLLEL GPDQKPLDWY TRMKIAAGAA RGLAYLHETA NPPVIYRDFK
201: SSNILLDENF DPKLSDFGLA KLGPTGDRSH VSTRVMGTYG YCAPDYACTG KLTVKSDVYS FGVVLLEIIT GRRVIDSSRP SEEKNLIKWA RPLISDKKLH
301: SIADPLLRGN YPRKALDKAL TVAAMCLQED ASTRPLISEV VTALDYILNI KKLDEDHKEE TADDTYKSPP ALQTITSHVD RIASNKPKCV RERY

Best Arabidopsis Sequence Match ( AT3G20530.1 )
(BLAST)

001: MKINCLFCCM SHRRFNRRSS SRQSIKDCID AKNNITTFDN ISFKTDSSRR RYISEEIAKL GKGNISAHIF TFRELCVATK NFNPDNQLGE GGFGRVYKGQ
101: IETPEQVVAV KQLDRNGYQG NREFLVEVMM LSLLHHQNLV NLVGYCADGD QRILVYEYMQ NGSLEDHLLE LARNKKKPLD WDTRMKVAAG AARGLEYLHE
201: TADPPVIYRD FKASNILLDE EFNPKLSDFG LAKVGPTGGE THVSTRVMGT YGYCAPEYAL TGQLTVKSDV YSFGVVFLEM ITGRRVIDTT KPTEEQNLVT
301: WASPLFKDRR KFTLMADPLL EGKYPIKGLY QALAVAAMCL QEEAATRPMM SDVVTALEYL AVTKTEEDGQ TVEGEEEEEE DERSKL

Arabidopsis Description

PBL23Probable serine/threonine-protein kinase PBL23 [Source:UniProtKB/Swiss-Prot;Acc:F4JEQ2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.