CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19633	Canola	cytosol, mitochondrion	96.5	97.02
CDY57665	Canola	cytosol	67.12	86.76
AT3G20530.1	Thale cress	mitochondrion	88.41	84.97
CDY36035	Canola	cytosol	84.64	84.41
CDX82241	Canola	cytosol	83.83	83.6
CDY43074	Canola	mitochondrion	81.4	83.2
CDY55594	Canola	plastid	81.4	82.97
VIT_19s0090g00030.t01	Wine grape	mitochondrion	66.58	70.17
KRH14431	Soybean	cytosol	67.12	65.7
PGSC0003DMT400037295	Potato	cytosol	69.81	65.4
KRH73720	Soybean	plastid	66.58	65.17
KRH46122	Soybean	cytosol	69.54	62.62
Solyc10g006340.2.1	Tomato	cytosol	68.19	62.32
Solyc12g005160.1.1	Tomato	cytosol	67.66	62.28
PGSC0003DMT400002807	Potato	cytosol	67.92	61.76
PGSC0003DMT400036145	Potato	cytosol	63.61	59.9
Solyc07g064340.2.1	Tomato	plasma membrane	64.42	57.73
CDY55687	Canola	plastid	57.41	56.8
CDY04867	Canola	plastid	56.87	56.12
CDY03295	Canola	cytosol	56.6	55.56
CDY39784	Canola	cytosol, plastid	56.33	55.29
CDY24861	Canola	cytosol, plastid	57.68	55.15
CDY47164	Canola	cytosol, plastid	57.95	54.71
CDY25327	Canola	cytosol, plastid	57.68	54.45
CDY65598	Canola	cytosol	56.6	53.85
CDX96628	Canola	cytosol	53.64	52.79
CDY29515	Canola	cytosol	54.18	52.76
CDY33638	Canola	cytosol	53.64	52.65
CDX88927	Canola	cytosol	62.8	52.48
CDY31493	Canola	cytosol	53.1	52.39
CDX93611	Canola	cytosol	56.33	52.38
CDX85669	Canola	cytosol	60.38	51.85
CDX91145	Canola	cytosol	60.38	51.73
CDY47330	Canola	cytosol	52.29	50.92
CDY07261	Canola	cytosol, plastid	35.04	50.58
CDY01117	Canola	cytosol	51.75	50.39
CDX78510	Canola	cytosol	59.84	50.11
CDY06282	Canola	cytosol	56.87	50.0
CDX97232	Canola	cytosol	61.19	49.89
CDX69664	Canola	cytosol	61.19	49.89
CDY32811	Canola	cytosol	56.6	49.88
CDX95117	Canola	cytosol	56.87	49.76
CDX88266	Canola	cytosol, nucleus, plastid	51.21	49.61
CDX70830	Canola	cytosol	62.53	49.57
CDY66752	Canola	cytosol	57.95	49.43
CDX85945	Canola	cytosol	50.67	49.34
CDX87608	Canola	cytosol	50.67	49.09
CDX92596	Canola	plastid	62.53	49.05
CDX74065	Canola	cytosol	58.22	48.87
CDY08017	Canola	cytosol	58.22	48.87
CDX68101	Canola	cytosol	50.13	48.82
CDY34917	Canola	cytosol	57.68	48.31
CDY05311	Canola	cytosol	57.14	48.07
CDY13906	Canola	plastid	62.53	47.93
CDX95766	Canola	cytosol	54.99	47.44
CDY22717	Canola	cytosol	56.06	47.06
CDX83297	Canola	cytosol	54.45	46.87
CDY53627	Canola	cytosol	59.84	45.12
CDY58830	Canola	nucleus	56.87	37.81
CDY51533	Canola	cytosol	52.02	35.03
CDY28710	Canola	cytosol	51.21	34.36
CDX74234	Canola	cytosol	50.4	32.92
CDX92014	Canola	cytosol	50.4	32.86
CDY07262	Canola	cytosol	5.12	32.2
CDX78694	Canola	cytosol	48.52	31.25
CDX70697	Canola	cytosol	48.52	30.77
CDY55581	Canola	cytosol	47.71	30.2
CDX69447	Canola	cytosol	48.25	30.19
CDY24650	Canola	mitochondrion	57.41	17.85

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:A0A078GXV4	UniProt:A0A078GXV4	EnsemblPlants:CDY29433
ProteinID:CDY29433	ProteinID:CDY29433.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00043043001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF127	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE4C55	:	:	:	:

Description

BnaC05g32370DBnaC05g32370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXV4]

Coordinates

chrLK032237:+:2802..4407

Molecular Weight (calculated)

42094.6 Da

IEP (calculated)

6.999

GRAVY (calculated)

-0.358

Length

371 amino acids

Sequence
(BLAST)

001: MKTCLFCCMS ERRFTRRLSS RQSIKEFDNI SFKTDSSRRR YIYEEITKLG RRNISAQIFT FKDLCVATKN FDPENQLGEG GFGRVYKGYI ETSDKVVAVK
101: QLDRNGYQGN REFLVEVMML GLLHHQNLVN LVGYCADGDQ RILVYEYMQN GSLEDHLLEL VRNKKKPLDW DTRMKVAAGA ARGLEYLHET ADPPVIYRDF
201: KASNILLDEE FNPKLSDFGL AKVGPTGGET HVSTRVMGTY GYCAPEYALT GQLTVKSDVY SFGVVFLEMI TGRRVIDPTK PTQEENLVTW ASPLFRDRRK
301: FTLMADPLLE GKYPIIGLYQ ALAVAAMCLQ EEAATRPMMS DVVSALEYLA MAKDKVDGEA VEDKGNYNKT N

Best Arabidopsis Sequence Match ( AT3G20530.1 )
(BLAST)

001: MKINCLFCCM SHRRFNRRSS SRQSIKDCID AKNNITTFDN ISFKTDSSRR RYISEEIAKL GKGNISAHIF TFRELCVATK NFNPDNQLGE GGFGRVYKGQ
101: IETPEQVVAV KQLDRNGYQG NREFLVEVMM LSLLHHQNLV NLVGYCADGD QRILVYEYMQ NGSLEDHLLE LARNKKKPLD WDTRMKVAAG AARGLEYLHE
201: TADPPVIYRD FKASNILLDE EFNPKLSDFG LAKVGPTGGE THVSTRVMGT YGYCAPEYAL TGQLTVKSDV YSFGVVFLEM ITGRRVIDTT KPTEEQNLVT
301: WASPLFKDRR KFTLMADPLL EGKYPIKGLY QALAVAAMCL QEEAATRPMM SDVVTALEYL AVTKTEEDGQ TVEGEEEEEE DERSKL

Arabidopsis Description

PBL23Probable serine/threonine-protein kinase PBL23 [Source:UniProtKB/Swiss-Prot;Acc:F4JEQ2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.